| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g024872m |
| Family | GT19 |
| Protein Properties | Length: 262 Molecular Weight: 28870.7 Isoelectric Point: 7.2346 |
| Chromosome | Chromosome/Scaffold: 00067 Start: 452168 End: 454396 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 17 | 258 | 0 |
| HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGS RLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHF LTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH | |||
| Full Sequence |
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| Protein Sequence Length: 262 Download |
| MIFAARYSHE RLNGPAHFHY VAPSFWAWKG GEARLKNLAA FVDHILCILP NEEAICRLNG 60 LAATFVGHPV VEDCLELNLG KGPEPCELKM EGNSEDFKNK YSVPSGATVI SLLPGSRLQE 120 VARMLPIFAK TVELLKDSFP ELITVIHVAP NRHVENYITG LIQKWPVPSI LVPGGSSNLK 180 YDAFSASRVA LCTSGTVAVE LQLARLPCVV AYRAHFLTEW FIRYKAKIPY ISLPNILLDS 240 PIIPEALLQA CTPDTLTHLL M* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 6.0e-18 | 19 | 245 | 230 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 2.0e-35 | 19 | 256 | 239 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 3.0e-44 | 19 | 253 | 235 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 2.0e-61 | 19 | 261 | 243 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 2.0e-62 | 18 | 261 | 246 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 5 | 261 | 114 | 370 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 8 | 256 | 147 | 395 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 5 | 260 | 146 | 394 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 8 | 256 | 127 | 375 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 5 | 261 | 152 | 408 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY663066 | 227 | 1 | 225 | 0 |
| EY717263 | 175 | 22 | 196 | 0 |
| DC601543 | 205 | 29 | 233 | 0 |
| GW439388 | 214 | 5 | 218 | 0 |
| EY717263 | 44 | 196 | 239 | 0.00000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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