Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g024928m |
Family | CE8 |
Protein Properties | Length: 261 Molecular Weight: 28868.8 Isoelectric Point: 8.0087 |
Chromosome | Chromosome/Scaffold: 00015 Start: 1397229 End: 1400342 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 250 | 0 |
VTVAQDGTGDYRTVQEAIDRVPLCNTRRTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLR CVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGK |
Full Sequence |
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Protein Sequence Length: 261 Download |
MASCVVTVAQ DGTGDYRTVQ EAIDRVPLCN TRRTLIRISP GVYRQPVYVP KTKNLITLAG 60 LCPENTVLTW NNTATKIEHH QAARVIGTGT FGCGSVIVEG EDFVAENITF ENSAPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALIEHCHIH 180 CKSQGFITAQ SRKSSQETTG YVFLRCVITG NGGTGYIYLG RPWGPFGRVV FAFTYMDQCI 240 RHVGWHNWGK QNAKPGLENC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-76 | 5 | 248 | 252 | + pectinesterase family protein | ||
pfam01095 | Pectinesterase | 3.0e-80 | 6 | 248 | 254 | + Pectinesterase. | ||
PLN02432 | PLN02432 | 4.0e-82 | 1 | 252 | 254 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-90 | 12 | 252 | 248 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 250 | 250 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 250 | 1 | 250 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 5 | 250 | 6 | 251 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 250 | 1 | 250 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 250 | 1 | 250 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 250 | 1 | 250 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 248 | 9 | 252 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-39 | 8 | 248 | 7 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 9e-20 | 3 | 254 | 5 | 285 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 9e-20 | 3 | 254 | 5 | 285 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 9e-20 | 3 | 254 | 5 | 285 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CD573689 | 250 | 1 | 250 | 0 |
FC911332 | 250 | 1 | 250 | 0 |
DY281667 | 250 | 1 | 250 | 0 |
FC883956 | 250 | 1 | 250 | 0 |
FC883979 | 250 | 1 | 250 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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