Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g026398m |
Family | AA2 |
Protein Properties | Length: 240 Molecular Weight: 25631.4 Isoelectric Point: 8.9823 |
Chromosome | Chromosome/Scaffold: 00051 Start: 474477 End: 477674 |
Description | ascorbate peroxidase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 116 | 239 | 3.7e-36 |
SKGKAASVLRLAFHDAGTFEMDDNSGGMNGSIVYELERPENAGLNKPLKILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDP EGKLPQETLDASGLKQCFQRKGFS |
Full Sequence |
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Protein Sequence Length: 240 Download |
MSSSTASSLC GCSTAYYSSP LLAPKFKFKF PAKSQRSSLS TVEFRANPLT ISSSLVNHRG 60 KDGSCNSNRR RRGLLLTATL PFLLPLHEFV QDLGAKAESG MSDYLLMKEE VTKVVSKGKA 120 ASVLRLAFHD AGTFEMDDNS GGMNGSIVYE LERPENAGLN KPLKILEKAK GDVNAIRPVS 180 WADMIALGGA VAVSVCGGPN IPVPMGRLDS MEPDPEGKLP QETLDASGLK QCFQRKGFS* 240 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd08201 | plant_peroxidase_like_1 | 5.0e-23 | 120 | 239 | 123 | + Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. |
PLN02879 | PLN02879 | 2.0e-23 | 104 | 239 | 151 | + L-ascorbate peroxidase |
cd00314 | plant_peroxidase_like | 7.0e-35 | 120 | 239 | 130 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. |
pfam00141 | peroxidase | 5.0e-35 | 108 | 239 | 142 | + Peroxidase. |
cd00691 | ascorbate_peroxidase | 2.0e-35 | 107 | 239 | 140 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18323.1 | 0 | 30 | 239 | 24 | 223 | unknown [Glycine max] |
RefSeq | NP_194958.2 | 0 | 25 | 239 | 23 | 233 | APX6; L-ascorbate peroxidase/ heme binding / peroxidase [Arabidopsis thaliana] |
RefSeq | XP_002282677.1 | 0 | 27 | 239 | 22 | 234 | PREDICTED: similar to APX6 (ASCORBATE PEROXIDASE 6); L-ascorbate peroxidase [Vitis vinifera] |
RefSeq | XP_002309628.1 | 0 | 27 | 239 | 27 | 241 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515511.1 | 0 | 19 | 239 | 11 | 232 | L-ascorbate peroxidase 1, cytosolic, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1apx_D | 3e-18 | 114 | 235 | 26 | 146 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_C | 3e-18 | 114 | 235 | 26 | 146 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_B | 3e-18 | 114 | 235 | 26 | 146 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_A | 3e-18 | 114 | 235 | 26 | 146 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 2xj6_A | 4e-18 | 102 | 235 | 9 | 146 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW510671 | 199 | 45 | 238 | 0 |
ES806697 | 156 | 87 | 239 | 0 |
EY843331 | 118 | 107 | 224 | 0 |
CX025415 | 143 | 97 | 239 | 0 |
DW506209 | 140 | 100 | 239 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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