Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g027337m |
Family | CBM57 |
Protein Properties | Length: 225 Molecular Weight: 25371.1 Isoelectric Point: 6.8606 |
Chromosome | Chromosome/Scaffold: 00952 Start: 36313 End: 40642 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 14 | 118 | 2.5e-21 |
AAAVTDAPLYDGARLCPNSLKYYGFCLRNGNYNISLFFSEIVFAKNDDYSSSAKRVFDIYIQSELMRKDFNIKEVARHSNNVTIQNFTASVHEHLLEIEL FWAGK |
Full Sequence |
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Protein Sequence Length: 225 Download |
MADSREFIQK VTCAAAVTDA PLYDGARLCP NSLKYYGFCL RNGNYNISLF FSEIVFAKND 60 DYSSSAKRVF DIYIQSELMR KDFNIKEVAR HSNNVTIQNF TASVHEHLLE IELFWAGKGS 120 LYNPPYFHGP LISAISVTPS TVQSCNHCIS DSSLIFSTQY IAMVLHSKGR LSELVDKQMP 180 NEHVVMKQAK IILELAMRCV DQSPTLRPTM SEVVSELERI SNWI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam11721 | Malectin | 1.0e-32 | 15 | 135 | 124 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002307889.1 | 2e-37 | 3 | 138 | 71 | 206 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322519.1 | 1e-36 | 7 | 138 | 63 | 194 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323341.1 | 1.4013e-45 | 2 | 140 | 345 | 483 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323341.1 | 0.000006 | 162 | 217 | 773 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002338709.1 | 4e-36 | 3 | 138 | 50 | 195 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY760973 | 156 | 1 | 156 | 0 |
FC922818 | 140 | 1 | 140 | 0 |
DY305959 | 140 | 1 | 140 | 0 |
CV706518 | 138 | 1 | 138 | 0 |
EY683334 | 141 | 1 | 141 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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