| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g027636m |
| Family | CE8 |
| Protein Properties | Length: 222 Molecular Weight: 24694.1 Isoelectric Point: 8.9917 |
| Chromosome | Chromosome/Scaffold: 10221 Start: 1 End: 1563 |
| Description | pectin methylesterase PCR fragment F |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 203 | 0 |
| MTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGIS IHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQ FIY | |||
| Full Sequence |
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| Protein Sequence Length: 222 Download |
| MTFENFAGPA KHQAVALRVG ADHAVVYRCN VIGYQDTLYV HSNRQFYREC DIYGTVDFIF 60 GNAAVVLQKC AIYARKPMAM QKNTITAQNR KDPNQNTGIS IHDCSLYAAP DLQASKGSIP 120 TYLGRPWKLY SRVVYMLTYM GDHIQPRGWL EWNGDFALDT LYYGEYMNSG PGSAVGHRVR 180 WPGYRVITSA TEASKFTVSQ FIYGSSWLPS TGVAFLGGLS V* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03043 | PLN03043 | 3.0e-115 | 1 | 219 | 219 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02713 | PLN02713 | 2.0e-122 | 1 | 219 | 219 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-124 | 3 | 219 | 217 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-146 | 1 | 205 | 205 | + Pectinesterase. | ||
| PLN02484 | PLN02484 | 1.0e-167 | 1 | 221 | 221 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42038.1 | 0 | 1 | 221 | 397 | 617 | pectin methylesterase 1 [Pyrus communis] |
| EMBL | CAE76634.1 | 0 | 1 | 221 | 34 | 254 | pectin methylesterase [Cicer arietinum] |
| EMBL | CBI23005.1 | 0 | 1 | 221 | 131 | 351 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 1 | 219 | 332 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 1 | 221 | 385 | 605 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 1 | 219 | 97 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 1 | 219 | 101 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.000000000000002 | 13 | 210 | 129 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000000000002 | 13 | 210 | 129 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.000000000000006 | 13 | 210 | 129 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX674885 | 222 | 1 | 222 | 0 |
| FC914287 | 222 | 1 | 222 | 0 |
| CV886273 | 222 | 1 | 222 | 0 |
| FC897524 | 218 | 1 | 218 | 0 |
| DY267638 | 218 | 1 | 218 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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