| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g027960m |
| Family | AA7 |
| Protein Properties | Length: 217 Molecular Weight: 23166.6 Isoelectric Point: 8.3337 |
| Chromosome | Chromosome/Scaffold: 01566 Start: 54 End: 832 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA7 | 69 | 214 | 0 |
| LVFSAPTNQKPLFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISIDAEAKTAWVQSGATVGQLNYRIAEKSQNLL AFPVGTCPGVGVGGHFSGGGYGALLRKYGVAADHIVDAHMIDAKGE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 217 Download |
| MKPHGLFCPN VISFVSSLLL LFRGAALAPE NHENFLKCLS LQSDTISKVI YTQNNSSYSS 60 VLKSSIQNLV FSAPTNQKPL FIITPFHVSE IQAAIKCSKK SGLQIRVRSG GHDLEGLSSI 120 SDVPFIIVDL INFSEISIDA EAKTAWVQSG ATVGQLNYRI AEKSQNLLAF PVGTCPGVGV 180 GGHFSGGGYG ALLRKYGVAA DHIVDAHMID AKGEKF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0277 | GlcD | 4.0e-10 | 76 | 214 | 140 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam01565 | FAD_binding_4 | 2.0e-21 | 79 | 214 | 137 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002299020.1 | 0 | 30 | 214 | 26 | 210 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299022.1 | 0 | 30 | 214 | 19 | 203 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299035.1 | 0 | 8 | 214 | 2 | 215 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330564.1 | 0 | 32 | 214 | 27 | 213 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330565.1 | 0 | 32 | 214 | 27 | 213 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vte_A | 0 | 33 | 214 | 5 | 188 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3tsj_B | 1.96182e-44 | 29 | 214 | 5 | 189 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3tsj_A | 1.96182e-44 | 29 | 214 | 5 | 189 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 3tsh_A | 1.96182e-44 | 29 | 214 | 5 | 189 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
| PDB | 4dns_B | 7.00649e-44 | 28 | 214 | 6 | 191 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
