Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g030415m |
Family | CBM43 |
Protein Properties | Length: 178 Molecular Weight: 19455.6 Isoelectric Point: 8.1352 |
Chromosome | Chromosome/Scaffold: 00559 Start: 47831 End: 48755 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 41 | 122 | 8.3e-37 |
WCVARSDASNQALQTALDYACGTGADCTPIQPNGLCYLPNTIQAHASYAFNSYFQRKGMAPGSCDFSGTATIAKTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 178 Download |
MASHQNLTLL SFTIIFSCMN MIMLNVMAAN VPVEGTGNST WCVARSDASN QALQTALDYA 60 CGTGADCTPI QPNGLCYLPN TIQAHASYAF NSYFQRKGMA PGSCDFSGTA TIAKTDPSYG 120 SCMYPSSLRY VLFFPCFVKI KKVNQFDIFL LFGSVYIGFF IFKLLGIFLS HRLIFCS* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-25 | 40 | 111 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-43 | 40 | 124 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 0 | 21 | 127 | 10 | 116 | unknown [Glycine max] |
RefSeq | NP_193096.5 | 0 | 41 | 129 | 61 | 149 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 30 | 128 | 41 | 137 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323780.1 | 0 | 41 | 118 | 1 | 78 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518089.1 | 0 | 6 | 131 | 4 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-25 | 40 | 126 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |