Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g032550m |
Family | CBM43 |
Protein Properties | Length: 139 Molecular Weight: 15322.2 Isoelectric Point: 7.0696 |
Chromosome | Chromosome/Scaffold: 00001 Start: 3943661 End: 3944642 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 52 | 135 | 8.3e-32 |
WCIAKPSTDDESLNHNIDYSCRQKGVDCRPIQPGGSCFNPDSIISHASFAMNLFYKSAGKNYWNCHFNGTGLIVTQNPSWGTCK |
Full Sequence |
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Protein Sequence Length: 139 Download |
MEGTRHALAF FLLALALLFW FADCSGHAEL SSTHSNGRVQ EERRNEGVVT SWCIAKPSTD 60 DESLNHNIDY SCRQKGVDCR PIQPGGSCFN PDSIISHASF AMNLFYKSAG KNYWNCHFNG 120 TGLIVTQNPS WGTCKYPA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-16 | 51 | 122 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-34 | 51 | 136 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2JON | 9e-29 | 51 | 138 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
GenBank | ABK25242.1 | 7e-29 | 44 | 136 | 391 | 488 | unknown [Picea sitchensis] |
RefSeq | XP_002273170.1 | 8e-40 | 1 | 136 | 1 | 130 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 4.00001e-40 | 31 | 137 | 27 | 133 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515203.1 | 7.00005e-41 | 1 | 136 | 1 | 132 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-30 | 51 | 138 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |