Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g033263m |
Family | CBM43 |
Protein Properties | Length: 124 Molecular Weight: 13519.6 Isoelectric Point: 7.7452 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1405603 End: 1406395 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 39 | 120 | 1.1e-28 |
WCVAKPSSSEAELAANIDFACNQIQNCNIIQEGGPCYYPNTAINHASVVMNLYYQLNGRNNWNCDYRASGLTTLSDPSYGGC |
Full Sequence |
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Protein Sequence Length: 124 Download |
MAKKVLSLPF LPLPLLLLLF FFASGGILKL ANGQEMKTWC VAKPSSSEAE LAANIDFACN 60 QIQNCNIIQE GGPCYYPNTA INHASVVMNL YYQLNGRNNW NCDYRASGLT TLSDPSYGGC 120 RYA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-15 | 38 | 103 | 71 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-32 | 38 | 122 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14756.1 | 3e-35 | 1 | 123 | 1 | 122 | unknown [Glycine max] |
EMBL | CBI30841.1 | 8e-38 | 24 | 122 | 82 | 177 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275460.1 | 2e-37 | 24 | 122 | 22 | 117 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519703.1 | 1e-39 | 26 | 122 | 30 | 124 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002528491.1 | 7e-40 | 13 | 123 | 8 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-26 | 38 | 122 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |