Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g034483m |
Family | CBM43 |
Protein Properties | Length: 94 Molecular Weight: 10618.1 Isoelectric Point: 8.5755 |
Chromosome | Chromosome/Scaffold: 00168 Start: 206607 End: 207293 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 8 | 88 | 3.4e-30 |
WCVAKPSSDQAALLANINYACSQIDCRILQKGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPSYSKC |
Full Sequence |
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Protein Sequence Length: 94 Download |
MVNGQKTWCV AKPSSDQAAL LANINYACSQ IDCRILQKGY PCFYPDNLMN HASISMNLYY 60 QAKGRNRWNC DFRNSALIVT TDPSYSKCVY SYL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-13 | 7 | 76 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 7 | 90 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ86001.1 | 1.96182e-44 | 1 | 91 | 23 | 113 | unknown [Medicago truncatula] |
RefSeq | XP_002285661.1 | 0 | 1 | 91 | 24 | 114 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300444.1 | 0 | 1 | 91 | 25 | 115 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332529.1 | 0 | 1 | 91 | 30 | 120 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528491.1 | 0 | 5 | 91 | 31 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-25 | 7 | 90 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC873608 | 94 | 1 | 94 | 0 |
GO242196 | 94 | 1 | 94 | 0 |
EY745508 | 94 | 1 | 94 | 0 |
CU573702 | 93 | 1 | 93 | 0 |
DW505352 | 90 | 1 | 90 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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