Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g036155m |
Family | CBM43 |
Protein Properties | Length: 225 Molecular Weight: 22827.4 Isoelectric Point: 6.8793 |
Chromosome | Chromosome/Scaffold: 00057 Start: 417902 End: 418783 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 83 | 164 | 5.2e-34 |
WCVASQSASHTALQVALDYACGYGADCSAIQPGGSCYNPNALRDHASYAFNSFYQKNPIPSSCNFGGAAVSTSTNPSSGTCQ |
Full Sequence |
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Protein Sequence Length: 225 Download |
ASVTSAQLGI EDKNVHLNSS ISTTKRDITT PITTVPIITP ATPTSSTPIL NPTSTPETTS 60 PAATTPSLTP PTTTTPVSTG ASWCVASQSA SHTALQVALD YACGYGADCS AIQPGGSCYN 120 PNALRDHASY AFNSFYQKNP IPSSCNFGGA AVSTSTNPSS GTCQYQSTST SSSILNTTNS 180 NGATVYGAVP NPPSPTASLA LAAAKPHSMS IFFPAPCFLM LQLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-21 | 83 | 152 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 83 | 158 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 1.4013e-45 | 11 | 178 | 37 | 205 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 1.4013e-45 | 11 | 178 | 37 | 205 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 0 | 60 | 219 | 58 | 219 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 12 | 223 | 38 | 235 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 0 | 18 | 178 | 28 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-17 | 73 | 169 | 4 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC890817 | 157 | 1 | 157 | 0 |
DY269377 | 158 | 1 | 158 | 0 |
EY781295 | 187 | 1 | 187 | 0 |
EY783006 | 148 | 1 | 148 | 1.4013e-45 |
CN549719 | 108 | 83 | 189 | 3.00018e-42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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