Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g036280m |
Family | CE8 |
Protein Properties | Length: 216 Molecular Weight: 23952.4 Isoelectric Point: 7.7193 |
Chromosome | Chromosome/Scaffold: 00055 Start: 450584 End: 453430 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 39 | 202 | 0 |
IVVDHSGHGNFSSIQSAIDNIPSNNKNWVCIFIKAGIYREKVRIPYEKPFIILKGVGKRKTQIIWDDHESLAASPTFASFADNVVVKCMSFVNSYNSPRS DNKNPRMPAVAAMVAGDKTAFYRCGFSGVQDTLWDDQGRHYFDRCTIEGAVDFIFGGGQSIYES |
Full Sequence |
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Protein Sequence Length: 216 Download |
MPFARFLFCL CVLLFTCHLG TTNAKSFFKL GSRAASCQIV VDHSGHGNFS SIQSAIDNIP 60 SNNKNWVCIF IKAGIYREKV RIPYEKPFII LKGVGKRKTQ IIWDDHESLA ASPTFASFAD 120 NVVVKCMSFV NSYNSPRSDN KNPRMPAVAA MVAGDKTAFY RCGFSGVQDT LWDDQGRHYF 180 DRCTIEGAVD FIFGGGQSIY ESMGVMEEEL TLPVE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 2.0e-43 | 39 | 202 | 175 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-51 | 31 | 201 | 171 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 8.0e-53 | 39 | 202 | 165 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-57 | 39 | 201 | 163 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 6.0e-107 | 38 | 202 | 165 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79494.1 | 0 | 39 | 201 | 32 | 194 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 38 | 202 | 33 | 199 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 39 | 201 | 32 | 194 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 39 | 207 | 1 | 169 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 39 | 206 | 48 | 213 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-19 | 39 | 194 | 9 | 161 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 0.00000000000006 | 26 | 209 | 19 | 221 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1xg2_A | 0.000000000001 | 40 | 201 | 6 | 164 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000006 | 39 | 202 | 7 | 187 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000006 | 39 | 202 | 7 | 187 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |