y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g037925m |
Family | GH35 |
Protein Properties | Length: 822 Molecular Weight: 91206.6 Isoelectric Point: 6.6509 |
Chromosome | Chromosome/Scaffold: 00010 Start: 1713366 End: 1718602 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 12 | 315 | 0 |
LVIDGKRRVLQSGSIHYPRSTPEVWPELIRKSKEGGLEVIETYVFWNYHEPIRGQYYFEGRFDLVRFVKTVQEAGLFLHLRIGPYACAEWNYGGFPVWLH FIPGIQFRTTNNPFKEEMKRFLAKIIDLMKQENLFASQGGPIILAQVENEYGNVEWAYGVGGELYVKWAADTAVNLNTSVPWVMCQQEDAPDPIINTCNG FYCDGFTPNSPSKPIMWTENYSGWFLSFGYAVPFRPVEDLAFAVARFFETGGTFQNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLR ELHK |
Full Sequence |
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Protein Sequence Length: 822 Download |
LSANVTYDHR ALVIDGKRRV LQSGSIHYPR STPEVWPELI RKSKEGGLEV IETYVFWNYH 60 EPIRGQYYFE GRFDLVRFVK TVQEAGLFLH LRIGPYACAE WNYGGFPVWL HFIPGIQFRT 120 TNNPFKEEMK RFLAKIIDLM KQENLFASQG GPIILAQVEN EYGNVEWAYG VGGELYVKWA 180 ADTAVNLNTS VPWVMCQQED APDPIINTCN GFYCDGFTPN SPSKPIMWTE NYSGWFLSFG 240 YAVPFRPVED LAFAVARFFE TGGTFQNYYM YFGGTNFGRT AGGPLVATSY DYDAPIDEYG 300 FIRQPKWGHL RELHKAIKLC EEYLISSDPT HQKLGAKLEA HIYHKSSNDC AAFLANYDSS 360 SDANVTFNGN VYFLPAWSVS ILPDCKNVVF NTAKVISQRN NGDHPFAQQK NVNELLLASS 420 AFSWYEEKVG ISGNRSFVRP DLAEQINTTK DTSDYLWYTA SIHVMPGQGK EVFLNIESLG 480 HAALVFVNKK LVAFGYGNHD FANFLINKKI ELNEGINTLD ILSMMVGLQN YGAWFDVAGA 540 GLFSVILIDL KNGKRDLSSG EWIYQVGVEG EYIGLDKISL ANSSFWKQGS TLPVNKSLIW 600 YKTTFLAPEG KGPLALNLAS MGKGQAWVNG QSIGRYWSAY LAPSTGCTKK CDYRGSYDAS 660 KCQKHCGQPA QTLYHIPRTW VHPGENLLVI HEELGGDPSK ISLLTKTGQH ICSFVSEADP 720 PPVDSWKPNL GVVSSSPQVR LACERGWHIA AINFASYGIP EGNCGSFRPG ACHMDVLPIV 780 QKACVGQIEC SIPVSSAYLG VSAGACPGLL KALAVEAHCS I* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0001 | 27 | 163 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 6.0e-14 | 741 | 819 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-20 | 5 | 307 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-151 | 11 | 317 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 820 | 831 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24373.1 | 0 | 2 | 820 | 28 | 861 | unknown [Picea sitchensis] |
EMBL | CBI16297.1 | 0 | 1 | 820 | 22 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002317239.1 | 0 | 5 | 820 | 36 | 848 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521428.1 | 0 | 2 | 820 | 27 | 840 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002530296.1 | 0 | 1 | 820 | 21 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.99878e-43 | 11 | 313 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0006 | 512 | 700 | 435 | 578 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-35 | 5 | 329 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-35 | 5 | 329 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 716 | 1 | 707 | 0 |
HO780602 | 666 | 55 | 707 | 0 |
HO795552 | 535 | 95 | 620 | 0 |
HO795552 | 56 | 1 | 56 | 4e-33 |
HO795552 | 83 | 56 | 134 | 4e-33 |
Sequence Alignments (This image is cropped. Click for full image.) |
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