| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g039165m |
| Family | GH116 |
| Protein Properties | Length: 957 Molecular Weight: 106593 Isoelectric Point: 6.3125 |
| Chromosome | Chromosome/Scaffold: 00055 Start: 21745 End: 31581 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 539 | 901 | 0 |
| GRFLYLEGVEYVMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNTGIRKLRGAVPHDLGTHDPWNEMNAYNIHDTSQWKDLNP KFVLQVYRDFAATGDMSFGVDVWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAAMALQLGDKPFAEYCKGKFLKA KSVFEEKLWNGSYFNYDSGSSSNSKSIQTDQLAGQWYTASSGLPSLFDEAQIKSTLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTY GVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 957 Download |
| MVSGNLFHCR KHSWPPEEYV GRATLQLLDF DSAAPPEQAW RRRLNSHANI LKEFSVTFME 60 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TRISCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIVPGT CEPSPVMANQ FSIFISRDGG NKHYASVLAP GQHEGLGKAG DQGIDSWGWN 180 LSGQHSTYHA LFPRAWTIYD GEPDPELKIS CRQISPFIPH NYRDSSLPTA VFVYTLVNTG 240 KDRAKVSLLF TWANSIGGIS HLSGDHVNEP FLGDDGVSGV LLHHKTARGN PPVTFAVAAC 300 ETQNVNVTVL PCFGLSEGSC VTAKGMWGTM VQDGQFDREN FKSGPSMPSS PGEALCAAVS 360 ASAWVEPHGK CTVAFALAWS SPKVKFLKGS SYHRRYTKFY GTSEGVAQDL VHDALMNYKR 420 WEEDIEKWQN PILRDDRLPE WYKFTLFNEL YFLVAGGTVW IDSRLPAPDK RNHRNGEKTD 480 VKGTEAEVNL SDGALVKYTT TSDYYSEDES VVNHEGSNSY SQHHPITLLN EENDSDDGGR 540 FLYLEGVEYV MWCTYDVHFY ASFALLELFP KIELNIQRDF AKAVLSEDGR KVKFLAEGNT 600 GIRKLRGAVP HDLGTHDPWN EMNAYNIHDT SQWKDLNPKF VLQVYRDFAA TGDMSFGVDV 660 WPAVRAAMEY MEQFDRDGDC LIENDGFPDQ TYDTWTVHGV SAYCGCLWLA ALQAAAAMAL 720 QLGDKPFAEY CKGKFLKAKS VFEEKLWNGS YFNYDSGSSS NSKSIQTDQL AGQWYTASSG 780 LPSLFDEAQI KSTLQKIFDF NVMKVKGGRM GAVNGMHPNG KVDETCMQSR EIWTGVTYGV 840 AATMILAGME KEAFTTAEGI FTAGWSEEGY GYWFQTPEAW TMDGHFRSLI YMRPLSIWGM 900 QWALSMPKTV LQAPEINIMD RISISPSAAA ISHEFGVRKI TNKAKCFGAA VFHCSC* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-28 | 92 | 462 | 378 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 5.0e-61 | 536 | 904 | 390 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 8.0e-62 | 102 | 421 | 330 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 7.0e-149 | 539 | 902 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 956 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 956 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 956 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 956 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 956 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 681 | 957 | 0 |
| HO779860 | 154 | 529 | 682 | 0 |
| HO779860 | 94 | 417 | 506 | 0 |
| DY261189 | 335 | 291 | 622 | 0 |
| DY261189 | 80 | 565 | 641 | 0.00008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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