Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g039329m |
Family | CE8 |
Protein Properties | Length: 421 Molecular Weight: 47163.1 Isoelectric Point: 6.7897 |
Chromosome | Chromosome/Scaffold: 00125 Start: 236534 End: 238961 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 104 | 393 | 0 |
TVDLHGCANFSSVQKAVDAVPSFSPSKTLIIIDSATYREKVVVNANKTNLIFLGRGYLNTIIEWNDTANSTGGTAYSSSVAVFASNFTAYNISFMNTAPW PSPGDVGGQAVALRIGGDQAAFYNCGFYGAQDTLYDDHGRHYFKDCFIQGSIDFIFGNARSLYEDCTINSIAEQVPDGMVSGSITAQGRQSMSEETGFSF VNCQIDGTGRVWLGRAWGVCAAVVFSKTYMADVVSSDGWNDWQDPSRDLTVFFGEYDCLGPGANYSYRASFGKQLMQYEAAPYMNISYID |
Full Sequence |
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Protein Sequence Length: 421 Download |
MRINSFWVFA LAVSLLSIII SLFITIPPPS STTTTIISLT QIPILIKRII VEDLLSLVTR 60 HHHHHHHHHH HHHRVKCDKT NWRLRIISHY KWLVYHYRVS LILTVDLHGC ANFSSVQKAV 120 DAVPSFSPSK TLIIIDSATY REKVVVNANK TNLIFLGRGY LNTIIEWNDT ANSTGGTAYS 180 SSVAVFASNF TAYNISFMNT APWPSPGDVG GQAVALRIGG DQAAFYNCGF YGAQDTLYDD 240 HGRHYFKDCF IQGSIDFIFG NARSLYEDCT INSIAEQVPD GMVSGSITAQ GRQSMSEETG 300 FSFVNCQIDG TGRVWLGRAW GVCAAVVFSK TYMADVVSSD GWNDWQDPSR DLTVFFGEYD 360 CLGPGANYSY RASFGKQLMQ YEAAPYMNIS YIDGDEWLHH HQDILFGFSE NGDRTFTRTY 420 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-93 | 100 | 398 | 300 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-104 | 88 | 398 | 318 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-105 | 102 | 398 | 298 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 8.0e-126 | 99 | 400 | 309 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 2.0e-151 | 102 | 398 | 299 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 31 | 398 | 30 | 399 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 77 | 400 | 74 | 387 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 102 | 398 | 14 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 91 | 414 | 3 | 327 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 28 | 408 | 31 | 377 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4.06377e-44 | 103 | 399 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-37 | 105 | 399 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000000001 | 113 | 308 | 18 | 227 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000001 | 113 | 308 | 18 | 227 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000000001 | 113 | 308 | 18 | 227 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |