| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g039338m |
| Family | GT4 |
| Protein Properties | Length: 494 Molecular Weight: 55759 Isoelectric Point: 8.1782 |
| Chromosome | Chromosome/Scaffold: 00341 Start: 38721 End: 40202 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 313 | 448 | 2e-23 |
| VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MAFNNKPKKT NPSFWQSNLC ITLFFIVIFT IPALFLLHTP TNLICPNLAT NHNVNKPWSG 60 DLRNAEFAWN LLSFLQNQPS KFTLKIAVFS RKWPISTTPG GMERHAHTLH VALARRGHRV 120 HIFTSPVDNI NSPSISHQEN DDGSNNKYPL LHFHEGEADK WRYSKGWEQF DEENQREPFD 180 VVHSESVALP HWLARNVTNL AVSWHGIALE SLQSGIFQDL TRKPLEPMSL AFNKSLQGVM 240 LKVLNEIRFF NKYAHHVAIS DSCGEMLRDV YQIPSERVHV ILNGINENEY GVDLSLGQSF 300 RSRIGIPKNA SLVLGVAGRL VKDKGHPLLH EAFSKLMVKY PDVYLIVAGS GPWEQRYKDF 360 GHQVLVMGSM SPAELRAFYN AIDIFVNPTL RPQGLDLTLM EAMMSGKPVM ASRFPSIKGT 420 IVVDDEFGFM FAPNVESLHK TLEAAVSEGP MRLAQRGEAC RQYAASMFTA NKMALAYERL 480 FLCIKNETFC DYP* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| cd03807 | GT1_WbnK_like | 7.0e-31 | 248 | 481 | 243 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| COG0438 | RfaG | 2.0e-32 | 85 | 487 | 413 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] |
| TIGR00032 | argG | 4.0e-34 | 100 | 480 | 400 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. |
| cd03798 | GT1_wlbH_like | 2.0e-40 | 86 | 481 | 411 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| cd03801 | GT1_YqgM_like | 4.0e-63 | 85 | 481 | 408 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002271072.1 | 0 | 38 | 493 | 37 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271108.1 | 0 | 1 | 493 | 1 | 492 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303479.1 | 0 | 1 | 492 | 1 | 488 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326600.1 | 0 | 1 | 492 | 1 | 487 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519899.1 | 0 | 1 | 493 | 2 | 486 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3c4v_B | 0.000002 | 92 | 431 | 14 | 353 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3c4v_A | 0.000002 | 92 | 431 | 14 | 353 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 3c4q_B | 0.000002 | 92 | 431 | 14 | 353 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
| PDB | 3c4q_A | 0.000002 | 92 | 431 | 14 | 353 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
| PDB | 3c48_B | 0.000003 | 79 | 431 | 16 | 373 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
