Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g039479m |
Family | GT47 |
Protein Properties | Length: 183 Molecular Weight: 21260.2 Isoelectric Point: 7.1246 |
Chromosome | Chromosome/Scaffold: 00193 Start: 224007 End: 224869 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 68 | 177 | 4.7e-31 |
KLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGA DHFMLSCHDW |
Full Sequence |
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Protein Sequence Length: 183 Download |
MDHPQVFSSQ MNQFNWVEAS LVRARSSIRE AALVRNLTSV HQDPDYVPRG PIYRNANAFH 60 RSYLLMEKLF KIYVYEEGEP PMFHDGPCKS IYSTEGRFIH EMERSNTYKT KDPEKALVYF 120 LPFSVVMMVE HLYVPGAHEI NAIGHSIVDY ISIISHKYPF WNRSLGADHF MLSCHDWVRN 180 SS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-12 | 66 | 181 | 123 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83915.1 | 0 | 4 | 180 | 206 | 382 | limonene cyclase like protein [Oryza sativa Japonica Group] |
EMBL | CBI28483.1 | 0 | 36 | 177 | 55 | 196 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001059081.1 | 0 | 4 | 177 | 206 | 379 | Os07g0188700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459470.1 | 0 | 4 | 177 | 172 | 345 | hypothetical protein SORBIDRAFT_02g005180 [Sorghum bicolor] |
RefSeq | XP_002524591.1 | 0 | 17 | 177 | 124 | 284 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV715989 | 133 | 51 | 183 | 0 |
CV523931 | 153 | 12 | 164 | 0 |
EE663713 | 152 | 12 | 163 | 0 |
CV715988 | 124 | 9 | 132 | 0 |
GR087704 | 164 | 17 | 177 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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