Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g039631m |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40121.2 Isoelectric Point: 7.5294 |
Chromosome | Chromosome/Scaffold: 00087 Start: 378022 End: 379603 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 72 | 357 | 0 |
IKVNQDGSGEFKTINDAINSIPQGNTKRVILSIGAGEYVEKIKIDRSKPFITFYGSPDAMPNVTFGGTAKEYGTVDSATLIVESDYFMAVNIIIANSSPR PDGKREGAQAVALRISGTKAAFYNCKIIGFQDTLCDDRGNHFFKDCHIQGTVDFIFGSGKSLYLSTELRAMGDTGLTVITAHARESESEDNGFAFVHCTI EGSGNGTYLGRAWKNSPRVVYAYTTMGNVVNRAGWSDNFRPERRQTVFYGEYKCSGPGASPAERVEYTKQLSDAEARPFLVLDYVQ |
Full Sequence |
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Protein Sequence Length: 370 Download |
MTHHVAAVFT IIIFIINHLA NSANGGGGDG AVIPPEKSQI GSWFTANVKP YTERKTTLDP 60 ALSTAQAGQR VIKVNQDGSG EFKTINDAIN SIPQGNTKRV ILSIGAGEYV EKIKIDRSKP 120 FITFYGSPDA MPNVTFGGTA KEYGTVDSAT LIVESDYFMA VNIIIANSSP RPDGKREGAQ 180 AVALRISGTK AAFYNCKIIG FQDTLCDDRG NHFFKDCHIQ GTVDFIFGSG KSLYLSTELR 240 AMGDTGLTVI TAHARESESE DNGFAFVHCT IEGSGNGTYL GRAWKNSPRV VYAYTTMGNV 300 VNRAGWSDNF RPERRQTVFY GEYKCSGPGA SPAERVEYTK QLSDAEARPF LVLDYVQGNQ 360 WILPPPAKV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-87 | 71 | 362 | 292 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-88 | 74 | 364 | 299 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 4.0e-89 | 68 | 362 | 305 | + pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-104 | 70 | 364 | 303 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 33 | 367 | 335 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 8 | 369 | 5 | 366 | unnamed protein product [Vitis vinifera] |
EMBL | CBI38548.1 | 0 | 1 | 369 | 5 | 371 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 29 | 366 | 27 | 364 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277388.1 | 0 | 1 | 369 | 1 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318197.1 | 0 | 29 | 366 | 25 | 363 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 6e-38 | 74 | 362 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 4e-37 | 72 | 362 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-18 | 71 | 350 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-18 | 71 | 350 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-18 | 71 | 350 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |