y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g040435m |
Family | GT8 |
Protein Properties | Length: 1992 Molecular Weight: 221891 Isoelectric Point: 6.5764 |
Chromosome | Chromosome/Scaffold: 00023 Start: 1235253 End: 1248720 |
Description | galacturonosyltransferase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 336 | 651 | 0 |
CLPLQLAADYYLQGHHKKEEQINEKFEDPSLYHYAIFSDNVLATSVVVNSTVAHAKEPEKHVFHIVTDKLNFVAMKMWFLVNAPPKATIQIENIDSFKWL NSSYCSVLRQLESARLKEYYFKANHPSSLSAGSDNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSVDLHGMVNGAVETCKESF HRFDKYLNFSNPLISENFSPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDANEDRTLWKLGTLPPGLITFYNLTYPLDRSWHVLGLGYDPALNLTQIDN GAVVHYNGNNKPWLDL |
Full Sequence |
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Protein Sequence Length: 1992 Download |
MEARRRFFTL SSFDRLLVVA LSLVIVHITT VNAEVPDVRR LQRELKAHRP LYDKGDGAAR 60 FNNDPDIKDI DIIATYSDVS GAVRISRVKM SHLSASWILE NPADGDNGLP NSSQTLGDSF 120 QAGMNLEENV EYPMGDHQSE EVGFFNRQKP PLSPVKLKRQ MLRQKRMELR TAELIRQDNE 180 NDNIMQETAF EQSKRLEPRV TGKYSIWRRD FESPNTDSTL KLMRDQIILA KAYAHVAKSK 240 NESSLYNSLM KHCKESQRAI GDANSDAELP SSALNQAQAM GHVLSIAKDQ LYDCPTVQRK 300 FRAMIQSTEG TVTALKRKSS FLIQLAAKIV PRPLHCLPLQ LAADYYLQGH HKKEEQINEK 360 FEDPSLYHYA IFSDNVLATS VVVNSTVAHA KEPEKHVFHI VTDKLNFVAM KMWFLVNAPP 420 KATIQIENID SFKWLNSSYC SVLRQLESAR LKEYYFKANH PSSLSAGSDN LKYRNPKYLS 480 MLNHLRFYLP EVYPKLEKIL FLDDDIVVQK DLTPLWSVDL HGMVNGAVET CKESFHRFDK 540 YLNFSNPLIS ENFSPNACGW AFGMNMFDLK EWRKRNITGI YHYWQDANED RTLWKLGTLP 600 PGLITFYNLT YPLDRSWHVL GLGYDPALNL TQIDNGAVVH YNGNNKPWLD LAVSKYKPYW 660 SKYVILWSLR LRTWNLRVKE LSKNGKWQEL FSHYHETKKV VVDLNDPSVY PLVVKACSNL 720 SYIHGRLVHA CLVKQGYESF TSIGNALMDF YMKWRFPDSA VAVFDDCICR DSVSWNIMIQ 780 GHLDHGTLGE GLWWFYKARV AGFEPNNSIL VLVIQACRCL GAYYEGLQVH GYIIRSGLWA 840 VHSVQNSVLS MYVDADMECA RKLFDEMCER DVISWSVMIG GYVQSAEAFS GLRLFRQMVS 900 GFKNEPDGQS LVSVLKACTN LRDLTMGRMV HGLVIYRGLG CDLFVGNSLI DMYAKCKDTD 960 SAFKVFSEMP QKNKVSWNSA LSGLVVNEKY SEALSLLYSM GKGVNEVDEI TLVNILQICK 1020 CFVHPMECKS VHCVILRRAF ESNELVLNSL IDGYSKCHLV ELAWKLFNDV KKPDVVLWST 1080 MIAGFTLCGR PREAIAVFQE MNQAQEKPNA ITIINLLEAC SVATELSSSK WAHGIAIRRC 1140 LAEEVAVGTA VVDMYAKCGA IEASRKAFDQ ISRKNIVSWS AMVAAYGMNG LAHEALALVA 1200 EMKLGGLQPN AVTTLSVLSA CSHGGLVEEG LSFFNSMVQD HGVEPALEHY SCMVDMLARA 1260 GELDIAIDLI NQMPDNLKAT ASAWGALLSA CRSYGNTELG AGATSRILEL EAQNSAGYLL 1320 ASSMYAAGGL WVESSGTRLL AKERGVKVVA GNSLVHVDNK ACKFIAGEKA QSHPRGSEVI 1380 LLACLVTAEK TDTLLIKDVT SSERHSKEYC AMYDICGERS DGKVLNCPYG SPSVKPDELF 1440 SAKIESLCPS ISGNVCCTET QFETLRAQVQ QAIPFLVGCP ACLRNFLNLF CELSCSPNQS 1500 QFINVTSVSE VNGNLTVDGI DYYVTSTFGE ELYNSCKDVK FGTMNTRAID FIGAGAKSFK 1560 EWFAFIGQKA PPGFPGSPYA INFKLSIPES SGLELMNVST YSCGDTSLGC SCGDCPLSPM 1620 CSSSEPPSPP RKEACTIRIG SLKVKCVELS LVIAYVVLIS TFFGWALFQR TRERRIPPSS 1680 VEPLIKSTSD SGPDSGIMEE VNARDLLPTE GGGLSVVQGY MLSFYRTYGR WVAANPAFVL 1740 CMSLAIGFVL CLGVIRFKVE TRPEKLWVGP GSRAAGEKQF FDSHLAPFYR IEQLILATLP 1800 DPKNGKQPSI ITEDNFQLLF EMQKKVDGVR ANDSASLVSI TDICLKPLGE DCASQSVLQY 1860 FKMDPENYDS YGGIEHAEYC FQHYASSDTC LSAFKAPLDP STVLGGFSGN NYSEASAFII 1920 TYPVNNAIDE TSKENRKAVA WEKAFIQLAK EELLPMVQSS NLTLSFSSES SLEEELKRES 1980 TADVVTIVVS L* 2040 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00917 | 2A060601 | 7.0e-172 | 1410 | 1990 | 595 | + Niemann-Pick C type protein family. The model describes Niemann-Pick C type protein in eukaryotes. The defective protein has been associated with Niemann-Pick disease which is described in humans as autosomal recessive lipidosis. It is characterized by the lysosomal accumulation of unestrified cholesterol. It is an integral membrane protein, which indicates that this protein is most likely involved in cholesterol transport or acts as some component of cholesterol homeostasis [Transport and binding proteins, Other]. | ||
PLN02523 | PLN02523 | 2.0e-174 | 214 | 664 | 470 | + galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 45 | 664 | 628 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 102 | 676 | 601 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 225 | 664 | 449 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95971.1 | 0 | 670 | 1392 | 11 | 737 | unknown [Populus trichocarpa] |
RefSeq | XP_002279627.1 | 0 | 670 | 1393 | 11 | 739 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002328268.1 | 0 | 670 | 1392 | 11 | 737 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328269.1 | 0 | 66 | 664 | 41 | 640 | glycosyltransferase, family GT8 [Populus trichocarpa] |
RefSeq | XP_002533896.1 | 0 | 68 | 664 | 39 | 628 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gkj_A | 4e-24 | 1410 | 1615 | 5 | 223 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gki_A | 4e-24 | 1410 | 1615 | 5 | 223 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gkh_A | 4e-24 | 1410 | 1615 | 5 | 223 | A Chain A, Npc1(ntd) |
PDB | 3qnt_A | 8e-20 | 1405 | 1618 | 9 | 243 | A Chain A, Npc1l1 (Ntd) Structure |
PDB | 1ga8_A | 0.00009 | 475 | 648 | 75 | 252 | A Chain A, Npc1l1 (Ntd) Structure |