Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g040637m |
Family | GH3 |
Protein Properties | Length: 454 Molecular Weight: 50267.6 Isoelectric Point: 8.5466 |
Chromosome | Chromosome/Scaffold: 00264 Start: 186138 End: 189921 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 122 | 252 | 8e-36 |
NVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVST IMVSYSSWNGEKMHANRELVTGFLKGTLKFK |
Full Sequence |
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Protein Sequence Length: 454 Download |
MVSLLSFANA EYAKYKDPKQ RVAVRVKDLL GRMSLEEKIG QMVQIDRTIA TVQFLKDYSI 60 GSVLSGGGST PLPQASAADW INMINDFQRG SLASRLGIPM IYGIDAVHGH NNVYNATIFP 120 HNVCRDPRWG RCYESYSEDH KIVQEMTDVI LGLQGDPPSN LRKGVPYVGG KDKVAACAKH 180 FVGDGGTTNG INENNTVIDM HGLLSIHMPA YSDSIIKGVS TIMVSYSSWN GEKMHANREL 240 VTGFLKGTLK FKVTFHFVFF ILHRYNTSTS DLRRILTLTK ILEGFVISDW QGIDRITSPP 300 HSNYTYSVQS GIQAGIDMVM IPFNLTEFID DLTDLVKNNV ITMDRIDDAV GRILLVKFSM 360 GLFENPLADL SLVNELGSQA HRDLAREAVR KSLVLLKNGK NESHPLIPLP KKAPKILVAG 420 SHADNLGYQC GGWTINWQGF SGNNYTRGTF FFT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-13 | 122 | 400 | 296 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 1.0e-37 | 18 | 427 | 469 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-49 | 33 | 436 | 448 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-53 | 34 | 354 | 362 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24412.1 | 0 | 6 | 453 | 19 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI24995.1 | 0 | 33 | 449 | 1 | 429 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 4 | 453 | 19 | 473 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 11 | 449 | 24 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 5 | 449 | 16 | 466 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 11 | 442 | 1 | 439 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 1x38_A | 0 | 11 | 442 | 1 | 439 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 1lq2_A | 0 | 11 | 442 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 11 | 442 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 11 | 442 | 1 | 439 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 430 | 61 | 453 | 0 |
DY289538 | 297 | 1 | 257 | 0 |
FN998758 | 359 | 58 | 379 | 0 |
DY283479 | 266 | 1 | 229 | 0 |
HO784016 | 51 | 12 | 62 | 0.000000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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