Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g040836m |
Family | GH3 |
Protein Properties | Length: 759 Molecular Weight: 83501.1 Isoelectric Point: 6.123 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1442718 End: 1445575 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 47 | 309 | 0 |
GVPRLGLPLYEWWSEALHGVSFIGRRTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTFWSPNINVVRDPRWGRV LETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRV NGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 759 Download |
RFESIKVKLS DFPYCDAKLP YPERAKDLVE RMTLPEKVQQ MGDLAYGVPR LGLPLYEWWS 60 EALHGVSFIG RRTNSPPGTH FDSEVPGATS FPTVILTTAS FNESLWKKIG QTVSTEARAM 120 YNLGNAGLTF WSPNINVVRD PRWGRVLETP GEDPYVVGRY AINYVRGLQD VEGVEYHRDS 180 DSRPLKISAC CKHYAAYDLD NWEGNDRFHF DSRVTEQDMQ ETFILPFEMC VNEGDVSSVM 240 CSYNRVNGIP TCADPKLLNQ TIRGDWNFHG YIVSDCDSIQ TIVESHKFLN DTKEDAVARV 300 LKAGLDLDCG DYYTNFTMGA VQQGKIAEAD IDTSLRFLYI VLMRLGYFDG SPQYKNLGKN 360 NICNPQHIEL AAEAARQGIV LLKNDNGALP LNTGNIKTLA LVGPHANATK AMIGNYEGTP 420 CRYTSPMDGF YAYSKVINYA PGCADIVCQN NSMIPAAIDA AKNADATVIV AGLDLSVEAE 480 GKDRVDLLLP GFQTELINKV ADAAKGPVTL VIMSAGAVDI NFAKNNPKIK SILWVGYPGE 540 EGGRAIADVI FGKYNPGGRL PITWYEANYV KIPYTSMPLR PVNNFPGRTY KFFDGPVVYP 600 FGYGLSYTQF KYKVASSPKS VDIKLDKDQQ CRDINYTVGT NKPPCAAVLI DDVKCKDYKF 660 TFQIEVENMG KMDGSEVVMV YSKPPGIAGT HIKQVIGYER VFIAAGQSAK VGFTMNACKS 720 LKIVDNAANS LLASGAHTIL VGEGVGGVSF PLQLNLNH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-55 | 379 | 608 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-57 | 35 | 407 | 381 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-61 | 47 | 336 | 293 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-71 | 27 | 716 | 781 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 10 | 743 | 752 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 1 | 758 | 53 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 758 | 54 | 805 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 755 | 57 | 806 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 27 | 756 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 1 | 755 | 55 | 800 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 89 | 715 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 89 | 715 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 89 | 715 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 89 | 715 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 5.60519e-45 | 23 | 685 | 2 | 642 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY932965 | 321 | 11 | 331 | 0 |
BX838810 | 310 | 14 | 323 | 0 |
GW867030 | 323 | 28 | 350 | 0 |
DY913727 | 309 | 45 | 353 | 0 |
BX837031 | 310 | 14 | 323 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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