Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g041112m |
Family | GH17 |
Protein Properties | Length: 342 Molecular Weight: 37441.8 Isoelectric Point: 9.2014 |
Chromosome | Chromosome/Scaffold: 00268 Start: 64154 End: 65179 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 8 | 326 | 0 |
GINYGRIADNIPSPESVVTLLKAAKIKNIRIYDADQAVLKAFSGSGIEIIVGLGNENLKDISVGEDRAMNWIKANVDPYLPGTKIRGIAVGNEILGGTDL ELSEVLLPAAKNVYSALERLGLAKLIEVSSPHSEAVFANSFPPSACVFREDVSQFMKPLLQFFSQIGSPFYINAYPFLAYKNDPEHIDLNYATFKSNRGI HDAKTNLHYDNMFDAMVDAAYAALEKAGFPKMDVIVSETGWASRGDENEAGANVKNAKIYNKNLRKRLLKKKGTPYRPKKPVKAYIFALFNENLKPGPTS ERNFGLFKADGSIAYEIGF |
Full Sequence |
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Protein Sequence Length: 342 Download |
NAFSGTYGIN YGRIADNIPS PESVVTLLKA AKIKNIRIYD ADQAVLKAFS GSGIEIIVGL 60 GNENLKDISV GEDRAMNWIK ANVDPYLPGT KIRGIAVGNE ILGGTDLELS EVLLPAAKNV 120 YSALERLGLA KLIEVSSPHS EAVFANSFPP SACVFREDVS QFMKPLLQFF SQIGSPFYIN 180 AYPFLAYKND PEHIDLNYAT FKSNRGIHDA KTNLHYDNMF DAMVDAAYAA LEKAGFPKMD 240 VIVSETGWAS RGDENEAGAN VKNAKIYNKN LRKRLLKKKG TPYRPKKPVK AYIFALFNEN 300 LKPGPTSERN FGLFKADGSI AYEIGFTGLV PSAASPSLHS FK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-5 | 4 | 317 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-99 | 8 | 326 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 1 | 335 | 23 | 357 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 1 | 335 | 34 | 368 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 1 | 329 | 24 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 2 | 342 | 12 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 2 | 342 | 3 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 8 | 326 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 8 | 326 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 8 | 326 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 8 | 327 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 8 | 327 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK988667 | 285 | 1 | 285 | 0 |
EL455956 | 297 | 2 | 298 | 0 |
CO114700 | 263 | 1 | 263 | 0 |
ES912714 | 266 | 2 | 267 | 0 |
DT729331 | 236 | 2 | 236 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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