PlantCAZyme

CAZyme Information

Basic Information
Species	Citrus sinensis
Cazyme ID	orange1.1g041590m
Family	GH9
Protein Properties	Length: 494 Molecular Weight: 55232.7 Isoelectric Point: 8.7419
Chromosome	Chromosome/Scaffold: 00134 Start: 269829 End: 274669
Description	glycosyl hydrolase 9A1
View CDS

External Links
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH9	36	465	0
DGDSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNMTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISG GNKIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYY ATGNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFSFYRRLIQ LNHGRPQPLQYVTNAAFLASLFSNCLSCWFTWMIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKRGWKWRDSSKPNPNTLVGAMVAGP HKHDGFHDVRSNYNYTVPTLHDNAGLVAAL

Full Sequence
Protein Sequence Length: 494 Download
MAGFITLQHI DIPKHNNFSP NYTLDTRPSC SSMPNDGDSC LTDGKFDSSG ITNDLLGGYY 60 DAGDAIKFHF PASFNMTMLS WSVIEYRAKY EAAGELNHVK EIIKWGTDYL LKTFNHSADS 120 ISRIIAQVGV GDISGGNKIP NDLYCWIRPE GIDYDRPVQE CTSSSDLAAE MAAASIVFKD 180 NEEYSKKLIH SAIMIFKFSR QYRGRYSAGG VEAGWFYNSR SYWDEFTWSG AWLYYATGNS 240 SYLKLVTTTG LGKQAGIFRG ILDNSLLSWD NMPAGTALLL SRLRLLLNLG YPYDEMLRAF 300 HNQTAITMCS YLPNFSSWNA TKAKLSFSFY RRLIQLNHGR PQPLQYVTNA AFLASLFSNC 360 LSCWFTWMID YILGNNPQKM SYLVGFGSPY PQYVHHRGAS IPKNKIKYSC KRGWKWRDSS 420 KPNPNTLVGA MVAGPHKHDG FHDVRSNYNY TVPTLHDNAG LVAALVALSG KKSTGGIDKS 480 TIFTEVPLMF PAP*

Full Sequence

Protein Sequence Length: 494 Download

MAGFITLQHI DIPKHNNFSP NYTLDTRPSC SSMPNDGDSC LTDGKFDSSG ITNDLLGGYY    60
DAGDAIKFHF PASFNMTMLS WSVIEYRAKY EAAGELNHVK EIIKWGTDYL LKTFNHSADS    120
ISRIIAQVGV GDISGGNKIP NDLYCWIRPE GIDYDRPVQE CTSSSDLAAE MAAASIVFKD    180
NEEYSKKLIH SAIMIFKFSR QYRGRYSAGG VEAGWFYNSR SYWDEFTWSG AWLYYATGNS    240
SYLKLVTTTG LGKQAGIFRG ILDNSLLSWD NMPAGTALLL SRLRLLLNLG YPYDEMLRAF    300
HNQTAITMCS YLPNFSSWNA TKAKLSFSFY RRLIQLNHGR PQPLQYVTNA AFLASLFSNC    360
LSCWFTWMID YILGNNPQKM SYLVGFGSPY PQYVHHRGAS IPKNKIKYSC KRGWKWRDSS    420
KPNPNTLVGA MVAGPHKHDG FHDVRSNYNY TVPTLHDNAG LVAALVALSG KKSTGGIDKS    480
TIFTEVPLMF PAP* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02171	PLN02171	2.0e-79	37	459	457	+ endoglucanase
PLN02613	PLN02613	1.0e-81	37	459	456	+ endoglucanase
PLN02266	PLN02266	4.0e-83	28	459	466	+ endoglucanase
PLN02345	PLN02345	4.0e-101	37	460	456	+ endoglucanase
pfam00759	Glyco_hydro_9	1.0e-114	37	460	444	+ Glycosyl hydrolase family 9.

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAS45400.1	0	12	486	129	603	endo-1,4-beta-glucanase [Populus tremuloides]
GenBank	AAT75041.1	0	12	486	129	603	Cel9A [Populus tremula x Populus tremuloides]
EMBL	CAN68337.1	0	12	486	128	600	hypothetical protein [Vitis vinifera]
EMBL	CBI29606.1	0	12	486	11	485	unnamed protein product [Vitis vinifera]
RefSeq	XP_002269783.1	0	12	486	128	602	PREDICTED: hypothetical protein [Vitis vinifera]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ksd_A	0	47	468	40	428	B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB	1ksc_A	0	47	468	40	428	B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB	1ks8_A	0	47	468	40	428	A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.
PDB	2xfg_A	5e-39	37	468	56	459	B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB	1ia7_A	1e-38	47	467	42	425	B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

HO794674

500

486

HO796213

476

486

BF010444

501

486

HO778339

355

361

HO778339

111

376

486

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_014_00010.1	Aquca_058_00008.1	Aquca_014_00010.2	Aquca_014_00403.1
Arabidopsis lyrata	495032	858221	894138
Arabidopsis thaliana	AT5G49720.1	AT4G24260.1	AT1G65610.1
Brachypodium distachyon	Bradi1g09460.1	Bradi1g63560.1	Bradi5g14580.1
Brassica rapa	Bra000594	Bra040496	Bra019237	Bra013781	Bra022470
	Bra016970	Bra039767
Carica papaya	evm.model.supercontig_17.23	evm.model.supercontig_88.37	evm.model.supercontig_151.55	evm.model.supercontig_49.52
Capsella rubella	Carubv10027986m	Carubv10004382m	Carubv10019972m
Citrus clementina	Ciclev10000600m	Ciclev10014583m	Ciclev10024241m	Ciclev10003884m	Ciclev10003122m
Citrus sinensis	orange1.1g007014m	orange1.1g007041m	orange1.1g013516m	orange1.1g046335m	orange1.1g013288m
	orange1.1g043321m
Cucumis sativus	Cucsa.260330.1	Cucsa.178750.1	Cucsa.212770.1
Eucalyptus grandis	Eucgr.G00035.1	Eucgr.A00393.1	Eucgr.G00035.2	Eucgr.F02731.1
Fragaria vesca	mrna29283.1-v1.0-hybrid	mrna25126.1-v1.0-hybrid
Glycine max	Glyma09g02160.1	Glyma15g13080.1	Glyma17g00710.1	Glyma07g40090.1	Glyma20g06820.1
	Glyma06g12910.2	Glyma06g12910.3	Glyma04g41891.1
Gossypium raimondii	Gorai.011G089500.1	Gorai.010G143300.1	Gorai.010G143300.2	Gorai.008G141900.1	Gorai.010G143300.3
	Gorai.011G089500.2	Gorai.003G089600.1	Gorai.003G089600.2	Gorai.003G089600.3
Linum usitatissimum	Lus10026275	Lus10012162	Lus10026863	Lus10018918	Lus10028619
	Lus10010029	Lus10036331	Lus10007584
Malus domestica	MDP0000225700	MDP0000388002	MDP0000452189	MDP0000518321	MDP0000313820.215.533
	MDP0000313820.215.533	MDP0000308015	MDP0000896140	MDP0000140066.486.637	MDP0000140066.486.637
	MDP0000221017	MDP0000160026	MDP0000313820.118.215	MDP0000313820.118.215	MDP0000144703
Manihot esculenta	cassava4.1_003705m	cassava4.1_003712m	cassava4.1_026565m
Medicago truncatula	Medtr2g028480.1	Medtr3g082440.1	Medtr3g090540.1	Medtr4g128810.1
Mimulus guttatus	mgv1a003033m	mgv1a002977m	mgv1a002970m	mgv1a002960m	mgv1a022358m
	mgv1a018926m	mgv1a018124m	mgv1a024415m	mgv1a026839m
Oryza sativa	LOC_Os03g21210.1	LOC_Os03g52630.1	LOC_Os03g52630.2	LOC_Os04g41970.1	LOC_Os12g24040.1
Panicum virgatum	Pavirv00061241m	Pavirv00029143m	Pavirv00040687m	Pavirv00029144m	Pavirv00038435m
	Pavirv00038432m	Pavirv00007671m	Pavirv00061242m	Pavirv00005986m	Pavirv00061243m
	Pavirv00044338m	Pavirv00049329m	Pavirv00048097m
Physcomitrella patens	Pp1s190_6V6.1	Pp1s157_35V6.1	Pp1s35_333V6.1	Pp1s15_429V6.1	Pp1s64_152V6.1
Phaseolus vulgaris	Phvul.003G089600.1	Phvul.006G133700.1	Phvul.006G004900.1	Phvul.009G135900.1
Picea abies	MA_69345g0010	MA_102312g0010.133.408	MA_102312g0010.133.408	MA_9211546g0010	MA_102312g0010.413.556
	MA_102312g0010.413.556	MA_6683906g0010.193.294	MA_6683906g0010.193.294
Populus trichocarpa	Potri.003G151700.1	Potri.003G151700.2	Potri.001G078900.1	Potri.003G151700.3	Potri.010G177300.1
	Potri.008G079500.1	Potri.010G177300.3	Potri.010G177300.2	Potri.003G151700.4	Potri.005G188500.1
	Potri.002G071200.1
Prunus persica	ppa002911m	ppa014845m	ppa026228m	ppa019140m
Ricinus communis	30063.m001436	29929.m004502	30076.m004696	27985.m000864
Setaria italica	Si034713m	Si009616m	Si012680m	Si035386m
Selaginella moellendorffii	266522	75214
Sorghum bicolor	Sb01g036480.1	Sb01g008860.1	Sb06g021440.1
Thellungiella halophila	Thhalv10012978m	Thhalv10024681m	Thhalv10018270m	Thhalv10003366m	Thhalv10012932m.108.387
	Thhalv10012932m.108.387	Thhalv10012932m.412.610	Thhalv10012932m.412.610
Vitis vinifera	GSVIVT01023102001	GSVIVT01006265001	GSVIVT01010049001	GSVIVT01006152001
Zea mays	AC199765.4_FGT008

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis lyrata

495032

858221

894138

Arabidopsis thaliana