Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g041957m |
Family | GH35 |
Protein Properties | Length: 735 Molecular Weight: 81657.3 Isoelectric Point: 6.3555 |
Chromosome | Chromosome/Scaffold: 00363 Start: 74084 End: 81943 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 17 | 307 | 0 |
LIINGERKVLFSGSIHYPRSPREMWPSLISKAKEGGLDVIQTYVFWNLHEPQPGKYDFSGRRDLVRFIKEIQAQGLYASIRIGPFIQSEWSYGGLPFWLH DVPGITFRCDNEPFKKMKRLYASQGGPIILSQIENEYQMVENAFGERGPPYIKWAAEMAVGLQTGVPWVMCKQDDAPDPVINACNGRKCGETFKGPNSPN KPSIWTENWTSRYQAYGEDPIGRTADDIAFHVALWVARNGSFVNYYMYHGGTNFGREASAFVTASYYDDAPLDEYGMINQPKWGHLKELHA |
Full Sequence |
---|
Protein Sequence Length: 735 Download |
MSGGVRGGEV TYDGRSLIIN GERKVLFSGS IHYPRSPREM WPSLISKAKE GGLDVIQTYV 60 FWNLHEPQPG KYDFSGRRDL VRFIKEIQAQ GLYASIRIGP FIQSEWSYGG LPFWLHDVPG 120 ITFRCDNEPF KKMKRLYASQ GGPIILSQIE NEYQMVENAF GERGPPYIKW AAEMAVGLQT 180 GVPWVMCKQD DAPDPVINAC NGRKCGETFK GPNSPNKPSI WTENWTSRYQ AYGEDPIGRT 240 ADDIAFHVAL WVARNGSFVN YYMYHGGTNF GREASAFVTA SYYDDAPLDE YGMINQPKWG 300 HLKELHAAIK LCSNTLLLGK AMTPLQLGPK QEAYLFAENS SEECASAFLV NKDKQNVDVV 360 FQNSSYKLLA NSISILPDYQ WEEFKEPIPN FEDTSLKSDT LLEHTDTTKD TSDYLWYSFS 420 FQPEPSDTRA QLSVHSLGHV LHAFVNGVPV GSAHGSYKNT SFTLQTDFSL SNGINNVSLL 480 SVMVGLPDSG AYLERKRYGP VAVSIQNKEG SMNFTNYKWG QKVGLLGENL QIYTDEGSKI 540 IQWSKLSSSD ISPPLTWYKT VFDATGEDEY VALNLNGMRK GEARVNGRSI GRYWPSLITP 600 RGEPSQISYN IPRSFLKPTG NLLVLLEEEG GDPLSITLEK LEAKVVHLQC APTWYITKIL 660 FASYGTPFGG CGRDGHAIGY CDSPNSKFAA EKACLGKRSC LIPASDQFFD GDPCPSKKKS 720 LIVEAHCGPI SIMG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-6 | 37 | 94 | 59 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-19 | 648 | 727 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-20 | 10 | 153 | 164 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-142 | 16 | 309 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 10 | 727 | 819 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18990.1 | 0 | 5 | 727 | 23 | 816 | unnamed protein product [Vitis vinifera] |
EMBL | CBI18991.1 | 0 | 11 | 727 | 33 | 820 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306647.1 | 0 | 10 | 727 | 2 | 763 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327281.1 | 0 | 4 | 727 | 20 | 787 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521778.1 | 0 | 2 | 727 | 16 | 827 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.99756e-43 | 16 | 305 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-30 | 6 | 296 | 7 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-30 | 6 | 296 | 7 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO778160 | 702 | 10 | 640 | 0 |
HO780602 | 591 | 60 | 598 | 0 |
HO795552 | 529 | 100 | 576 | 0 |
HO795552 | 54 | 8 | 61 | 0 |
HO795552 | 40 | 61 | 100 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|