Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g042396m |
Family | GH10 |
Protein Properties | Length: 472 Molecular Weight: 52948.5 Isoelectric Point: 8.1376 |
Chromosome | Chromosome/Scaffold: 00084 Start: 388114 End: 390901 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 178 | 440 | 0 |
KQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADK RINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHF STPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKP |
Full Sequence |
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Protein Sequence Length: 472 Download |
CLEKPHKPQY GGGIIKNPEL SHGLKGWSAF GNAKIEQRES GGNNSCISQK VYLEKNKFYT 60 LSAWIQVSEG AAPVTAVFKT ITGFKHAGAA VAESKCWSML KGGLSPDASG FAELYFESKN 120 TSVDIWVDSI SLQPFTQEEW RSQQHQSIEK NHKTNVRIQA VDKQGKPLQN ANISIEQKQL 180 RFPFGCAINK NILTNTAYQN WFTSRFKVTA FEDEMKWYST EASPGREDYS ASDAMLQFAK 240 NHNIAVRGHN IFWDDPQYQP GWVNSLSPSD LSKAADKRIN SVTSRYKGQV IAWDVVNENL 300 HFSFFESKLG QNASGVFFNR VHSLDGATTL FMNDYNTIED SRDGKATPAM YLQKLRQISE 360 FPGNQNLRIG IGLESHFSTP NIPYMRASID TLGATGLPIW LTEVDVQSSP NQAQYLEQIL 420 REAHAHPKVQ GIVVWAAWKP SGCYRMCLTD NNFKNLATGD VVDKLLHEWG SK 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 1.0e-31 | 208 | 406 | 211 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 9.0e-55 | 181 | 454 | 301 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-77 | 215 | 462 | 275 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 1 | 470 | 40 | 520 | endoxylanase [Carica papaya] |
RefSeq | XP_002264556.1 | 0 | 1 | 469 | 120 | 596 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002264605.1 | 0 | 1 | 472 | 35 | 516 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 1 | 470 | 3 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 1 | 469 | 31 | 510 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 3e-28 | 184 | 454 | 15 | 292 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1e0v_A | 2e-25 | 184 | 465 | 16 | 300 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0n_A | 3e-25 | 184 | 465 | 16 | 300 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0m_A | 3e-25 | 184 | 465 | 16 | 300 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0l_A | 3e-25 | 184 | 465 | 16 | 300 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 276 | 197 | 470 | 0 |
GE471597 | 297 | 116 | 412 | 0 |
AM722845 | 263 | 152 | 413 | 0 |
DV141191 | 250 | 173 | 420 | 0 |
FL914612 | 262 | 140 | 400 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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