y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g042845m |
Family | CE8 |
Protein Properties | Length: 328 Molecular Weight: 35728.4 Isoelectric Point: 9.0664 |
Chromosome | Chromosome/Scaffold: 00302 Start: 133755 End: 135170 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 27 | 297 | 0 |
RVEKYGRGDFRTIQEAIDSVPANNSELVFISVAPGIYKEKIIVPANKPFITISGTKASHTKITWSDGGSILDSATLTVLASHFVARSLTIQNTYGSFGKA VALRVSADKAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSFFERCLIHSLSTWGGAITAQKRVSSEENTGFTFLDCKISGVGKAVLGRP WGAYSRVVYALTYMSDVIVPQGWNDLNDHAKHNKLYYGEYRCSGPGADRSKRIAWSNSLSDVEASTFLSKD |
Full Sequence |
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Protein Sequence Length: 328 Download |
IVFASITATC GFSATIPKDI STAVLIRVEK YGRGDFRTIQ EAIDSVPANN SELVFISVAP 60 GIYKEKIIVP ANKPFITISG TKASHTKITW SDGGSILDSA TLTVLASHFV ARSLTIQNTY 120 GSFGKAVALR VSADKAAFYG CRILSYQHTL LDDTGNHYYS KCYIEGATDF ISGNANSFFE 180 RCLIHSLSTW GGAITAQKRV SSEENTGFTF LDCKISGVGK AVLGRPWGAY SRVVYALTYM 240 SDVIVPQGWN DLNDHAKHNK LYYGEYRCSG PGADRSKRIA WSNSLSDVEA STFLSKDLTG 300 RGTWLRNAAL KFKDDFTIND ANIKGNR* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 4.0e-86 | 25 | 297 | 292 | + pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-92 | 19 | 306 | 305 | + pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-93 | 25 | 305 | 297 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-107 | 12 | 307 | 312 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-165 | 14 | 306 | 293 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 10 | 312 | 27 | 332 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 10 | 325 | 45 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 20 | 325 | 1 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 19 | 313 | 20 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 19 | 313 | 37 | 331 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 32 | 312 | 15 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 28 | 314 | 7 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.0000000000006 | 36 | 300 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.0000000000006 | 36 | 300 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.0000000000006 | 36 | 300 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 261 | 17 | 277 | 0 |
AM721699 | 255 | 17 | 271 | 0 |
AJ795739 | 213 | 6 | 217 | 0 |
DR952425 | 208 | 17 | 224 | 0 |
EX283718 | 204 | 121 | 324 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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