| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g043219m |
| Family | CBM49 |
| Protein Properties | Length: 592 Molecular Weight: 66196.6 Isoelectric Point: 6.7441 |
| Chromosome | Chromosome/Scaffold: 00157 Start: 250906 End: 253959 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 499 | 578 | 3.5e-29 |
| VEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQ | |||
| GH9 | 25 | 485 | 0 |
| NYDEALDKTFLFFEAQRSGKLQENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYF MKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAK QFYTSSGYSDDLLWAATWLYRATNEEYYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYN VHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSMASVYNLH SPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFIDDRSNYEQTEPTLTACAPLVGLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 592 Download |
| MRSLSFCIFI FLVAFKAAAD AAEYNYDEAL DKTFLFFEAQ RSGKLQENQR VKWRGDSGLK 60 DGSLQGVDLV GGYYDAGDHV KFGLPAAFTV TMLAWGTIEY RKEITELNQM GHALWAIRWG 120 TDYFMKAHTQ PNVLWAQVGD GDSDHYCWER AEDMTTPREA FKLDQYHPGS DLAGETAAAL 180 AASAIAFKPY NSSYSELLLL HAKQLFSFAD RFRGLYDDSI KCAKQFYTSS GYSDDLLWAA 240 TWLYRATNEE YYLKYVVDNA EYMGGTGWAV KEFSWDNKYA GVQILLSKVL MEGRGGAYTA 300 TLKQYKAKAD YFACACVQKN AGYNVHLTPG GLMYVREWNN MQYASAAAFL LSVYYDYLSA 360 ANAKLNCPDG QIQPQQLFDF AKSQADYILG KNPNSMSYLV GYGPKYPVHV HHRGSSMASV 420 YNLHSPVGCV QGFETWYRRN EGNPNVLHGA LVGGPDQNDK FIDDRSNYEQ TEPTLTACAP 480 LVGLFSKLQG SSKTSENPVE FLHSIASTWN VGETTYYKHK VIIKNTSQKP ITDLKLTIEN 540 LSGSLWGLSP TSENRTYQLP PWLKVLKPGS QCTFVYVQGG PQAKVSVLSY N* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 1 | 591 | 612 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 30 | 590 | 595 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 30 | 488 | 461 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 3 | 488 | 486 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 30 | 486 | 459 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 2 | 591 | 3 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 24 | 591 | 29 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 30 | 591 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 21 | 591 | 23 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 1 | 591 | 1 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 484 | 3 | 431 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 1ksc_A | 0 | 24 | 484 | 3 | 431 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 1ks8_A | 0 | 24 | 484 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 530 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 530 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
