| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g043397m |
| Family | GT5 |
| Protein Properties | Length: 597 Molecular Weight: 66542.6 Isoelectric Point: 6.8772 |
| Chromosome | Chromosome/Scaffold: 00013 Start: 68966 End: 82075 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 110 | 591 | 0 |
| HIIHITAEMAPIAKVGGLGDVVTGLARACLSRGHTVDIMLPFYECIQKQEISDLALITTYNSYHDGNWVATNAYHGVVSSIPVIFIEPSNQFFKGKNVYG GSYNELEAYLFFSRACLEWMQVTGVQPDIIHVHEWQIGALPLLYWDMYQSLSLKKPRIVLTIHNMEHYGECRQEQLSKCGLDGSIYASVEKAIDDRTIGH NPERLSLLKGGIVYSNAVVTVSPTYLKETLCSGWLASVLITHRDKYFGILNGIDTVIWNPATDAFLPAKFHAQKPEGKKICKYYIQKGLGLKSEGTVPLV VCITRLVAQKGLHLITHAIKRAEELGGQMILLGNSPVHWVQKDFEDLANLHNKGTSTRILLMYSEELSHMLYAAADIVLVPSIYEPCGLAQMIGMRYGAV PVVRKTGGLADTVFDVDDPSNHEKANGFVFEGIDEGSLNWALDRAFRHFIDKPEEWNRIVQKIMENDNSWNNAAGKYMEIYN | |||
| Full Sequence |
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| Protein Sequence Length: 597 Download |
| MECAIAGKLS STSSYLVNTR RNGMKRTKLM ANHNMFYSSK SMISLPILAH TNPSLAVVTE 60 KLGCPADFGF GELVWPTPGD EIPFWKNKFP SRYASLEAPA EIEKDSNLMH IIHITAEMAP 120 IAKVGGLGDV VTGLARACLS RGHTVDIMLP FYECIQKQEI SDLALITTYN SYHDGNWVAT 180 NAYHGVVSSI PVIFIEPSNQ FFKGKNVYGG SYNELEAYLF FSRACLEWMQ VTGVQPDIIH 240 VHEWQIGALP LLYWDMYQSL SLKKPRIVLT IHNMEHYGEC RQEQLSKCGL DGSIYASVEK 300 AIDDRTIGHN PERLSLLKGG IVYSNAVVTV SPTYLKETLC SGWLASVLIT HRDKYFGILN 360 GIDTVIWNPA TDAFLPAKFH AQKPEGKKIC KYYIQKGLGL KSEGTVPLVV CITRLVAQKG 420 LHLITHAIKR AEELGGQMIL LGNSPVHWVQ KDFEDLANLH NKGTSTRILL MYSEELSHML 480 YAAADIVLVP SIYEPCGLAQ MIGMRYGAVP VVRKTGGLAD TVFDVDDPSN HEKANGFVFE 540 GIDEGSLNWA LDRAFRHFID KPEEWNRIVQ KIMENDNSWN NAAGKYMEIY NSIRVG* 600 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 5.0e-136 | 109 | 594 | 494 | + synthase/transferase | ||
| PRK00654 | glgA | 3.0e-157 | 109 | 594 | 498 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 3.0e-172 | 109 | 593 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 2.0e-172 | 106 | 592 | 496 | + transferase, transferring glycosyl groups | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 110 | 592 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13790.1 | 0 | 63 | 595 | 83 | 613 | starch synthase VI precursor [Solanum lycopersicum] |
| GenBank | ACD13791.1 | 0 | 57 | 595 | 56 | 606 | starch synthase VI precursor [Vitis vinifera] |
| GenBank | ACL36485.1 | 0 | 72 | 595 | 118 | 654 | starch synthase VI precursor [Picea glauca] |
| RefSeq | XP_002268126.1 | 0 | 57 | 595 | 56 | 606 | PREDICTED: starch synthase VI [Vitis vinifera] |
| RefSeq | XP_002331426.1 | 0 | 1 | 594 | 3 | 615 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 109 | 594 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 109 | 595 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 109 | 595 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 109 | 595 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 109 | 595 | 1 | 478 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GE474726 | 265 | 131 | 395 | 0 |
| EX373959 | 300 | 183 | 470 | 0 |
| CO474248 | 254 | 129 | 382 | 0 |
| EY654065 | 212 | 1 | 212 | 0 |
| EY654065 | 46 | 194 | 233 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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