Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g043974m |
Family | CE8 |
Protein Properties | Length: 345 Molecular Weight: 38532.2 Isoelectric Point: 6.235 |
Chromosome | Chromosome/Scaffold: 00001 Start: 4282664 End: 4284200 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 332 | 0 |
ISVSRSGGGNFTKIQDAINFIPVNNDQWIRIQISPEIYQEKVTIPQNKPCIFLEGASSRTTKIQWGDHDTTISSPTFTSLSENVVAKGILFQNTYNVPPS YRQNQERMEVKQALAARISGDKSAFYNCGFAGLQDTLFDDHGRHYFHQCYIEGAIDFIFGNGQSIYHNCAVNVTLKEYLPEKDYGYITAQGRNSTDDPSG FVFTSCQFLGSGKAYLGRAYGAFSRVIIVNSVLTDMVEPQGWNAWNHVEHEENIEYAEARCRGAGADTSKRVSWEKHLSVDEVKKFTDSSFID |
Full Sequence |
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Protein Sequence Length: 345 Download |
MYYLNSFLFA VTLLLLSSNV STALDCKLNN ANPLKVAYTI SVSRSGGGNF TKIQDAINFI 60 PVNNDQWIRI QISPEIYQEK VTIPQNKPCI FLEGASSRTT KIQWGDHDTT ISSPTFTSLS 120 ENVVAKGILF QNTYNVPPSY RQNQERMEVK QALAARISGD KSAFYNCGFA GLQDTLFDDH 180 GRHYFHQCYI EGAIDFIFGN GQSIYHNCAV NVTLKEYLPE KDYGYITAQG RNSTDDPSGF 240 VFTSCQFLGS GKAYLGRAYG AFSRVIIVNS VLTDMVEPQG WNAWNHVEHE ENIEYAEARC 300 RGAGADTSKR VSWEKHLSVD EVKKFTDSSF IDHDGWIAKL PSVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-88 | 39 | 342 | 308 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-90 | 34 | 337 | 304 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-94 | 31 | 337 | 318 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 6.0e-113 | 30 | 341 | 312 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 6.0e-130 | 31 | 341 | 312 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002318946.1 | 0 | 8 | 341 | 9 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515255.1 | 0 | 1 | 341 | 1 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 22 | 343 | 23 | 341 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 23 | 343 | 349 | 662 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 36 | 343 | 36 | 339 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-39 | 36 | 337 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-31 | 42 | 337 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-20 | 40 | 341 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-20 | 40 | 341 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-20 | 40 | 341 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |