| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g045177m |
| Family | CBM57 |
| Protein Properties | Length: 461 Molecular Weight: 50971 Isoelectric Point: 6.3672 |
| Chromosome | Chromosome/Scaffold: 00243 Start: 219422 End: 222606 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 275 | 439 | 4.1e-33 |
| HINCGGSEVTANGDTAFEEDTYEAGPSTFTLSRTNWGLSSTGHFLDNSIKTDTYIQTNTSRLLMSDSQLYTNARLSAISLTYYGFCLGNGNYTVKLHFAE ILFTDDKNFSSFGKRIFDVYIQGNLVLKDLNIENEAGGVGKAIVKPFSAAVTNGTMEIRLYWAGK | |||
| Full Sequence |
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| Protein Sequence Length: 461 Download |
| SLLANRLTGP IPKYLANIST LVNLTVQYNQ FSGELPEELG SLLNLEKLHL SSNNFTGELP 60 KTFAKLTNMK DFRIGDNQFT GQIPSFIQNW TKLEKLFIQP SGLVGPIPSG IFSLEKFNGL 120 VCMVFLFLRI SDLNGPEATF PQLGNKKMTN LILRNCNITG ELPPYLGKMT TLKVLDLSFN 180 KLSGHIPSNF DDLYEVDYIY FTGNLLTGAI PPWMLEKGDK IDLSYNNFTD GSAESSCQKR 240 SVNLFASFSK GNNSTGIVSC LRSFQCPKTY YYSLHINCGG SEVTANGDTA FEEDTYEAGP 300 STFTLSRTNW GLSSTGHFLD NSIKTDTYIQ TNTSRLLMSD SQLYTNARLS AISLTYYGFC 360 LGNGNYTVKL HFAEILFTDD KNFSSFGKRI FDVYIQGNLV LKDLNIENEA GGVGKAIVKP 420 FSAAVTNGTM EIRLYWAGKG TTEIPFKGDY GPLISAISLN P |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-16 | 2 | 272 | 287 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-17 | 1 | 212 | 216 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 4.0e-20 | 2 | 244 | 247 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-21 | 2 | 256 | 259 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-58 | 272 | 457 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI20121.1 | 0 | 1 | 461 | 137 | 587 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20124.1 | 0 | 1 | 461 | 166 | 616 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20124.1 | 0.0001 | 50 | 211 | 120 | 273 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283596.1 | 0 | 1 | 461 | 166 | 616 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283596.1 | 0.0001 | 50 | 211 | 120 | 273 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 8e-20 | 2 | 221 | 372 | 562 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 3rj0_A | 9e-19 | 2 | 229 | 446 | 714 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 3rj0_A | 2e-18 | 1 | 229 | 272 | 524 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 3rj0_A | 0.000000000005 | 1 | 211 | 493 | 718 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 3rj0_A | 0.00000000005 | 4 | 229 | 206 | 476 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC916246 | 297 | 8 | 303 | 0 |
| DY283633 | 297 | 8 | 303 | 0 |
| CX295479 | 202 | 1 | 202 | 0 |
| CX295479 | 185 | 54 | 233 | 0.000002 |
| CX295479 | 119 | 154 | 270 | 0.007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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