y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g045354m |
Family | GH35 |
Protein Properties | Length: 616 Molecular Weight: 69312.2 Isoelectric Point: 7.6769 |
Chromosome | Chromosome/Scaffold: 01068 Start: 22346 End: 26865 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 2 | 252 | 0 |
DQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIYKNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGN IMGPYKEAGKSYINWCAQMATSQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGV LQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHE |
Full Sequence |
---|
Protein Sequence Length: 616 Download |
GDQYDFSGNL DFIKFFKLVQ EAGLYAIIRI GPYVCSEWNY GGFPVWLHNI PGIQLRTNNE 60 IYKNEMQIFT TKIVNMCKEA NLFAPQGGPI ILAQIENEYG NIMGPYKEAG KSYINWCAQM 120 ATSQNIGVPW IMCQQSDAPQ PMINTCNGFY CDEFVPNNPK SPKMWTENWT GWFKKWGDKD 180 PHRTPQDVSF AVARFFQAGG VLQNYYMYHG GTNFGRDAGG PFIITSYDYD APLDEYGNLN 240 QPKWGHLKQL HEAIKLGEKL LTSGNVTTKQ FGNGVNLTTY SNTTSGERFC FLSNTNTSQD 300 ANVDLQQDGK YFVPAWSVSI LHGCNKEVYN TAKVNTETTV MVKKPIELGT KLSWMWAQET 360 IRDTLHGKGR FNATKLIEQK EATSDESDYL WYMTSIENMG KSSHNATLYV KSSGQVLHAY 420 VNSKHIGSQF GYDFEFKQPA ILRPGKNFLT LLSATVGLQN YGEFFDLGPE GLAGGPVELN 480 VDGMASLNLS SNIWNYKVGL NGEAKRLYDP NSPHPQIWKS SKKLPIGKPM KWYRTSFKIP 540 PGTSPVVVDL QGMGKGHAWV NGNSLGRYWP SQIADTNGCS DTCDYRGEYK PEKCVTNCGN 600 PSQRWYNFNH FLQQM* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 3.0e-8 | 3 | 244 | 300 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-120 | 2 | 254 | 268 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 3 | 607 | 616 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27773.1 | 0 | 3 | 607 | 101 | 710 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002276918.1 | 0 | 3 | 607 | 32 | 641 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 3 | 608 | 32 | 654 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 3 | 607 | 91 | 695 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516256.1 | 0 | 3 | 607 | 108 | 722 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-34 | 3 | 250 | 69 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 3e-28 | 3 | 238 | 64 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 3e-28 | 3 | 238 | 64 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DY264749 | 353 | 91 | 443 | 0 |
DY283799 | 328 | 277 | 604 | 0 |
FC887049 | 322 | 277 | 598 | 0 |
FC915116 | 312 | 91 | 402 | 0 |
HO778160 | 614 | 4 | 607 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|