Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046047m |
Family | GH17 |
Protein Properties | Length: 273 Molecular Weight: 29736.5 Isoelectric Point: 4.2278 |
Chromosome | Chromosome/Scaffold: 00003 Start: 1777426 End: 1778244 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 271 | 0 |
TGINLIIGVPNEILPSLAAGSPTFSLEWLQSNIFYNIPTNQIRYLAVGNEVLSKDPYYSPFVVPAMTNLYQALQTLNLANSVKLSSPQAASVLSASYPPS SGTFDPYIVSNIVPLLRFLNDTNSPFMVNVYPYLSYTSSSEYISLDYALFRSDKAVLQDGALAYGNLFYASIDAFIYAMEKQGFVGVPLVVTETGWPTSG GAEASVENALAYNENVVRRALAGVGTPKRPGQGVEVYLFDLFDEDGKSGEEYEKHFGIFGLDGSKIYDIRF |
Full Sequence |
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Protein Sequence Length: 273 Download |
TGINLIIGVP NEILPSLAAG SPTFSLEWLQ SNIFYNIPTN QIRYLAVGNE VLSKDPYYSP 60 FVVPAMTNLY QALQTLNLAN SVKLSSPQAA SVLSASYPPS SGTFDPYIVS NIVPLLRFLN 120 DTNSPFMVNV YPYLSYTSSS EYISLDYALF RSDKAVLQDG ALAYGNLFYA SIDAFIYAME 180 KQGFVGVPLV VTETGWPTSG GAEASVENAL AYNENVVRRA LAGVGTPKRP GQGVEVYLFD 240 LFDEDGKSGE EYEKHFGIFG LDGSKIYDIR FN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam10846 | DUF2722 | 0.0006 | 25 | 115 | 95 | + Protein of unknown function (DUF2722). This eukaryotic family of proteins has no known function. | ||
COG5309 | COG5309 | 4.0e-8 | 187 | 259 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-84 | 1 | 271 | 271 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG38164.1 | 0 | 1 | 271 | 77 | 347 | glucan endo-1,3-beta-glucosidase, acidic isoform precursor [Zea mays] |
EMBL | CAA82271.1 | 0 | 1 | 272 | 74 | 344 | beta-1,3-glucanase [Nicotiana tabacum] |
EMBL | CAN59926.1 | 0 | 1 | 272 | 67 | 337 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001150185.1 | 0 | 1 | 271 | 77 | 347 | glucan endo-1,3-beta-glucosidase, acidic isoform [Zea mays] |
RefSeq | XP_002264917.1 | 0 | 1 | 272 | 68 | 338 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 271 | 46 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 1 | 272 | 48 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 1 | 272 | 48 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 1 | 272 | 48 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 1 | 272 | 48 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY274271 | 271 | 1 | 271 | 0 |
FC899645 | 243 | 1 | 243 | 0 |
DY276945 | 259 | 1 | 259 | 0 |
FC915319 | 224 | 1 | 224 | 0 |
DY272919 | 243 | 1 | 242 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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