CAZyme Information

Basic Information
SpeciesCitrus sinensis
Cazyme IDorange1.1g046094m
FamilyGH18
Protein PropertiesLength: 246 Molecular Weight: 27639.5 Isoelectric Point: 7.6834
ChromosomeChromosome/Scaffold: 00078 Start: 109869 End: 110966
Description
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18281841.6e-21
  ILSFAIDVDPSGNYQNGKFSPYWAETLTPDSVAAVKARHPNVKALASLSGWSLGSKVLHWYNPRNPQIWISNAFSSLKSIIQEYHLDGIDIDYEKFPMRN
  ASTPSFAYCIGELITQLKNQSVISVATIAPFYSTALPYIKLYKDYGHVVDYVNYQFY
Full Sequence
Protein Sequence     Length: 246     Download
MMEYIGATGI PVKFDSMPIK DGIDFHFILS FAIDVDPSGN YQNGKFSPYW AETLTPDSVA    60
AVKARHPNVK ALASLSGWSL GSKVLHWYNP RNPQIWISNA FSSLKSIIQE YHLDGIDIDY    120
EKFPMRNAST PSFAYCIGEL ITQLKNQSVI SVATIAPFYS TALPYIKLYK DYGHVVDYVN    180
YQFYTDKVRS PRGYLEAFKL RVEQFGREKM VPSYEVNGRG IQGQAFFDAL RLLQANGFEV    240
NGGVL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02871GH18_chitinase_D-like1.0e-596184104+
smart00636Glyco_181.0e-726185176+
pfam00704Glyco_hydro_181.0e-926184165+
cd00598GH18_chitinase-like4.0e-1126184161+
cd06544GH18_narbonin3.0e-861237243+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAI22848.10322097312chitinase A [Equisetum arvense]
EMBLCAN65355.101242143381hypothetical protein [Vitis vinifera]
RefSeqXP_002274616.10124267305PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002328469.1022421238predicted protein [Populus trichocarpa]
RefSeqXP_002517257.1012421239Chitinase 1 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B9.99967e-4212373245A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A9.99967e-4212373245A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A5e-2532177228A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB2ybu_F0.0012617836195A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB2ybu_E0.0012617836195A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY83128624122420
JG18611919011890
CX71248224532370
GD05387122032170
CO16532324632371.4013e-45
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny