Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046146m |
Family | GH35 |
Protein Properties | Length: 830 Molecular Weight: 92742.1 Isoelectric Point: 6.7485 |
Chromosome | Chromosome/Scaffold: 00162 Start: 178795 End: 186659 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 24 | 324 | 0 |
LIIHGRRKLFLSASIHYPRSVPAMWPELIQAAKEGGLNTIESYVFWSGHELSPGKYSFEGRYDLVKFVKTVQQAGMYMLLRIGPFVAAEYNYGGVPVWLH YIPGSVFRSYSKPFMSYMQKFMTLIVDMMKKEKLFASQGGPIILAQVENEYQWYEQFYKGGKEYAMWAASMAVSQNTGVPWIMCQQYDAPDPVILVTPST VTNSRLIHQKCPKFGLRIGLDGNTKNCLIYPHRPHQDVAFSVARFIQKGGSVHNYYMYHGGTNFGRTSGDFVTTSYDYDAPIDEYGLPRNPKWGHLKELH E |
Full Sequence |
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Protein Sequence Length: 830 Download |
MVILKSCFNS FCLAANVTYD HRSLIIHGRR KLFLSASIHY PRSVPAMWPE LIQAAKEGGL 60 NTIESYVFWS GHELSPGKYS FEGRYDLVKF VKTVQQAGMY MLLRIGPFVA AEYNYGGVPV 120 WLHYIPGSVF RSYSKPFMSY MQKFMTLIVD MMKKEKLFAS QGGPIILAQV ENEYQWYEQF 180 YKGGKEYAMW AASMAVSQNT GVPWIMCQQY DAPDPVILVT PSTVTNSRLI HQKCPKFGLR 240 IGLDGNTKNC LIYPHRPHQD VAFSVARFIQ KGGSVHNYYM YHGGTNFGRT SGDFVTTSYD 300 YDAPIDEYGL PRNPKWGHLK ELHEAIMLCE GVLLNSDPIN LSLGPSQEAD VYADSSGACA 360 AFLSNTDNAT DTTVVFRNVS YFLPAWSVSI LSDCKNVVFN TAKVSTQTSI IEMVPEYLQQ 420 SDSSADEGSK ALQWDVFKEM TGIWGEANFV KSGLVDHLNT TKDTTDYLWY TTSIIFSEDE 480 EFLRTGSQPV LLIESKGHTL HAFINQELVQ GNSTYSTGTL VFSFTALIPL KAGKNKIDLL 540 SMTVGLPSAG PFYEWTGTGL TSVKIKGFNN RTLDFSSYNW TYKIGVQGED LRIYNPDNLT 600 NVNWTPTSEP PKNQPLTWYK AVVNEPVGDE PIGLDMLHMG KGQAWLNGEP IGRYWDKRSS 660 IDDHCVQECD YRGTFNQQKC LTGSGEPTQR WYHVPRSWFK PSGNILVIFE EKGGDPTRIR 720 FSRRNISSIC GLVAADEDGN ESSNSNATIH LQCPKNRSIS TVKFASFGTP TGKCGSFRMG 780 DCHDPNSTSF VEKVCLNKNK CAIELTETNF NKGLCPDATK TLAVEVTCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.002 | 39 | 174 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 6.0e-16 | 17 | 316 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-16 | 751 | 828 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 6.0e-125 | 23 | 326 | 333 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 15 | 829 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 16 | 829 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 16 | 829 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 13 | 829 | 19 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 7 | 829 | 12 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 10 | 829 | 22 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 2e-30 | 17 | 309 | 11 | 318 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 3thd_C | 2e-30 | 17 | 309 | 11 | 318 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 3thd_B | 2e-30 | 17 | 309 | 11 | 318 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 3thd_A | 2e-30 | 17 | 309 | 11 | 318 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 3thc_D | 2e-30 | 17 | 309 | 11 | 318 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 717 | 13 | 716 | 0 |
HO780602 | 619 | 67 | 680 | 0 |
HO795552 | 535 | 107 | 636 | 0 |
HO795552 | 67 | 3 | 68 | 0 |
HO780602 | 35 | 679 | 713 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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