y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046395m |
Family | GH5 |
Protein Properties | Length: 536 Molecular Weight: 61281.6 Isoelectric Point: 6.9273 |
Chromosome | Chromosome/Scaffold: 00321 Start: 178814 End: 182706 |
Description | Thioesterase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 173 | 441 | 0 |
MRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETV AIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN IDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAE |
Full Sequence |
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Protein Sequence Length: 536 Download |
MEPNMFYGIK NNDLLDGTQV QLISTKLKKY LTAENGSETI LMANHNSSST SSWQTFRLWR 60 INETFYNFRL SNKQFIGLEN QGNKLVAVSA TEKFPEPFQI TRKNGEPHRV RFRASNGYFL 120 QAKSEMQVTA DYKGPSTWEE NDPSVFNMTI VSTMHGEYQI TNGYGPDKAA KLMRDHWKSY 180 ITEEDFKFMS QNGLNAVRIP VGWWIAYDPK PPKPFVGGSL QALDNAFRWA QKYGMKVIVD 240 LHALRVSQNG SPHSGSRDGF QEWSDSDIQE TVAIIDFLAS RYADHPSLVA IELMNEPKAP 300 DLKLDSLKTY YKAGYDTVRK YSSSAYVILS NRLGGEWSEL LSFASNLSRV VIDVHFYNLF 360 WDNFNKMSVQ QNIDYIYRQR SSDLRNVTTS DGPLSFVGEW SCEWEAEGAS KRDYQRFAEA 420 QLDVYGRATF GWAYWAYKFA ESPQKALTLS SSTLSSLHWQ TQVTHIFSSL NEPNDTDKIT 480 PIETRFPAYP TVMHVNQIRG ILPSRVRSKR EDGIKNLKEF GDDYYRPSTG IEDSS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 0.0008 | 124 | 242 | 122 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
cd00257 | Fascin | 0.0001 | 18 | 140 | 126 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam02449 | Glyco_hydro_42 | 7.0e-8 | 175 | 320 | 167 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam00150 | Cellulase | 2.0e-18 | 176 | 440 | 276 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 5.0e-31 | 145 | 439 | 329 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74231.1 | 0 | 1 | 466 | 158 | 605 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18831.1 | 0 | 1 | 442 | 50 | 490 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 1 | 466 | 50 | 503 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 1 | 438 | 50 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309987.1 | 0 | 1 | 440 | 1 | 438 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2pc8_A | 4e-39 | 157 | 454 | 51 | 383 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 1eqp_A | 4e-39 | 157 | 454 | 45 | 377 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 3n9k_A | 6e-39 | 157 | 454 | 50 | 382 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 2pb1_A | 6e-39 | 157 | 454 | 51 | 383 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
PDB | 2pbo_A | 7e-39 | 157 | 454 | 51 | 383 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC898905 | 358 | 82 | 438 | 0 |
DC899299 | 298 | 142 | 438 | 0 |
CX664525 | 328 | 1 | 326 | 0 |
CO076384 | 301 | 130 | 429 | 0 |
DW515145 | 297 | 136 | 431 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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