Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g046585m |
Family | GH35 |
Protein Properties | Length: 811 Molecular Weight: 90533.1 Isoelectric Point: 7.2055 |
Chromosome | Chromosome/Scaffold: 00013 Start: 1538570 End: 1542741 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 11 | 313 | 0 |
IIDGKRKVIIAGSIHYPRSTPEMWPDLIRKAKEGGVDAIETYIFWDVHEPQRRKYDFSGNLDFVKFFKLVQDAGLYAIIRIGPYVCAEWNYGGFPMWLHN TPGIQLRTNNDIFKNEMQVFTTKIVNMCKEANLFASQGGPIILAQIENEYGNIMEKYGDAGKKYIKWCANMAVAQNISEPWIMCQQSDAPEPMINTCNGF YCDQFTPNNPKSPKMWTENWTGWFKLWGGRDPQRTAEDLAFSVARFFQSGGVLNNYYMYHGGTNFGRTAGGPYIATSYDYNAPLDEYGNLNQPKWGHLKQ LHE |
Full Sequence |
---|
Protein Sequence Length: 811 Download |
IKVEYDANAI IIDGKRKVII AGSIHYPRST PEMWPDLIRK AKEGGVDAIE TYIFWDVHEP 60 QRRKYDFSGN LDFVKFFKLV QDAGLYAIIR IGPYVCAEWN YGGFPMWLHN TPGIQLRTNN 120 DIFKNEMQVF TTKIVNMCKE ANLFASQGGP IILAQIENEY GNIMEKYGDA GKKYIKWCAN 180 MAVAQNISEP WIMCQQSDAP EPMINTCNGF YCDQFTPNNP KSPKMWTENW TGWFKLWGGR 240 DPQRTAEDLA FSVARFFQSG GVLNNYYMYH GGTNFGRTAG GPYIATSYDY NAPLDEYGNL 300 NQPKWGHLKQ LHEAIKQAEK FFTDGIVETK NISTYVNLTQ FTVKATGERF CMLSNGDNTG 360 DYTADLGPDG KFFVPAWSVT FLQGCTEEVY NTAKINTQRS VMVNKHSHEN EKPAKLAWAW 420 TPEPIQDTLD GNGKFKAARL LDQKEASGDG SDYLWYMTRV DTKDMSLENA TLRVSTKGHG 480 LHAYVNGQLI GTQFSRQATG QQMVTGDDYS FGFDKAVSSL KKGVNVISLL SVTVGLTNYG 540 AFYDLHPTGL VEGSVLLREK GKDIIDATGY EWSYKVGLNG EAQHFYDPNS KNVNWSCTDV 600 PKDRPMTWYK TSFKTPPGKE AVVVDLLGMG KGHAWVNGRS IGRYWPTQIA ETSGCDPHCN 660 YRGTYKDDKC RTNCGNPSQR WYHVPRSFLN KNADNTLILF EEVGGAPWNV TFQVVTVGTV 720 CANAQEGNKV ELRCQGHRKI SEIQFASFGD PLGTCGSFSV GNHQADQTVS VVEKLCLGKP 780 SCSIEVSQST FGHSSLGNLT SRLAVQAVCK * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-8 | 25 | 180 | 171 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-13 | 732 | 809 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-24 | 3 | 305 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-158 | 9 | 315 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 3 | 809 | 840 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 3 | 809 | 25 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 1 | 809 | 38 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 2 | 809 | 24 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324727.1 | 0 | 33 | 775 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 3 | 809 | 30 | 823 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 4 | 311 | 9 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 8.99998e-41 | 12 | 299 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 8.99998e-41 | 12 | 299 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO778160 | 728 | 3 | 719 | 0 |
HO780602 | 625 | 53 | 667 | 0 |
DW076707 | 311 | 3 | 313 | 0 |
DY280097 | 262 | 2 | 263 | 0 |
HO780602 | 36 | 669 | 704 | 0.000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|