Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046652m |
Family | GT47 |
Protein Properties | Length: 519 Molecular Weight: 58567.7 Isoelectric Point: 7.2238 |
Chromosome | Chromosome/Scaffold: 00304 Start: 19519 End: 21075 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 92 | 436 | 0 |
CLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAG LDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPS KESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCI PVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV |
Full Sequence |
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Protein Sequence Length: 519 Download |
MAGINCWSQQ LGFAILISFV LCFVLLCFDY SALTSTTTTT SHSGHSTPLV NNFANANANA 60 HAIITNSSDD SISPLPHNPL VIVLNQTEID SCLGRYIYIH QLPGRFNQDL LKNCHLLTPG 120 TDKNMCPYLG NFGFGPGINE ENQEIVLLNE SWFLTNQFLL EVIFHNKMKN YRCLTNDSSI 180 ASAIYVPFYA GLDIGRYLFG GVSTLLRDSS GLDLVKWLAE KPEWKKLWGR DHFLVAGRIA 240 WDFRRQTDNE SDWGSKFRFL PESKNMSMLS IESSSWNNDF AIPYPTCFHP SKESEIIGWQ 300 DRMRKRKRQY LFSFAGAPRP DLKGSIRGKI IDQCLASGSL CRLIDCNYGA TNCDNPVNVM 360 KMFQNSVFCL QPPGDSYTRK SVFDTILAGC IPVFFHPGTA YAQYLWHLPK NYSSYSLYIP 420 VRDVKDWRVN VNETLVGISE DRILALREQV VRLIPSVIYA DPRSKLETLE DAFDLAVKGI 480 LERIEQVRSS IRQGRGPGVG FADGDDYKYT FAPYGKES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-65 | 91 | 438 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10178.1 | 0 | 13 | 514 | 25 | 475 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 13 | 514 | 33 | 514 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 6 | 518 | 15 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 10 | 517 | 10 | 495 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 6 | 518 | 9 | 528 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |