Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046961m |
Family | CBM57 |
Protein Properties | Length: 293 Molecular Weight: 32662.6 Isoelectric Point: 7.9134 |
Chromosome | Chromosome/Scaffold: 09963 Start: 243 End: 2094 |
Description | receptor-like kinase in flowers 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 57 | 238 | 1.4e-27 |
HINCGGNEVKVNGSTFEGDGQIGGGAATYHSQDDTNWGFSSSGDFTDDDDEQNRRYIATPDSSNLSELYINARIAPLSLTYFGYCLDNGNYTLSLHFAEV QFSNGITFFSLGRRLFDIYIQDKLVERNFDIKAEASGALKPVARPYNVTVTNHIIEIHFHWAGKGTTALPKRGVYGPLVSAI |
Full Sequence |
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Protein Sequence Length: 293 Download |
DLSYNNFTHQ NPEQPACREI QNLNLNLFRS SSGDSNLSGV LPCRNNFKCD RYWHSLHINC 60 GGNEVKVNGS TFEGDGQIGG GAATYHSQDD TNWGFSSSGD FTDDDDEQNR RYIATPDSSN 120 LSELYINARI APLSLTYFGY CLDNGNYTLS LHFAEVQFSN GITFFSLGRR LFDIYIQDKL 180 VERNFDIKAE ASGALKPVAR PYNVTVTNHI IEIHFHWAGK GTTALPKRGV YGPLVSAISL 240 NDPNFKPEKK KVVPIVVGVV AGLSLIILAF GILGWRYYLR TKRRKERGVG FF* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03150 | PLN03150 | 0.0006 | 140 | 225 | 89 | + hypothetical protein; Provisional | ||
pfam12819 | Malectin_like | 0.0004 | 144 | 208 | 65 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
pfam11721 | Malectin | 1.0e-54 | 54 | 238 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30739.1 | 0 | 1 | 247 | 67 | 317 | unnamed protein product [Vitis vinifera] |
EMBL | CBI30740.1 | 0 | 1 | 246 | 352 | 599 | unnamed protein product [Vitis vinifera] |
EMBL | CBI30742.1 | 0 | 1 | 245 | 27 | 274 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264679.1 | 0 | 1 | 245 | 351 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317385.1 | 0 | 1 | 247 | 346 | 588 | predicted protein [Populus trichocarpa] |