Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g047018m |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40640.4 Isoelectric Point: 8.9 |
Chromosome | Chromosome/Scaffold: 00013 Start: 1419600 End: 1421567 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 75 | 358 | 0 |
ITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVERSKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPM PDGKRLGAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRTTIVSVANGLGVITAQAREQVNDDSGFTFVHCNIT GSGDTYLGRAWKERPRVLFAYTYMGTLINSQGWAAGEHSQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLN |
Full Sequence |
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Protein Sequence Length: 370 Download |
MASAYFTMLL ICFRLSITTV LAHPKQIPLD ASKLEAWIGE NMREFTERKA QLAQGKNDTV 60 VDHVLAAAED GFRVITVRKD GRGDFKTVTD AVKSIPSGNT RRVVVKIGGG EYWEKITVER 120 SKDFVTFFGD PFDMPKIVFN GTALHFGTVN SATVAVESDY FVAANVAFVN SAPMPDGKRL 180 GAQAVAMRIS GDKAAFHNCK FIGYQDTLCD DKGRHFFKDC YIQGTVDFIF GNGKSLYLRT 240 TIVSVANGLG VITAQAREQV NDDSGFTFVH CNITGSGDTY LGRAWKERPR VLFAYTYMGT 300 LINSQGWAAG EHSQSHKTVY YGEYKCMGPG ASSSGRVKFA KLLSEAEAKP FLSMTYLNGN 360 KWLLPLPNL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 9.0e-87 | 71 | 365 | 303 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-88 | 74 | 363 | 299 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-90 | 74 | 365 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-106 | 73 | 365 | 301 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 369 | 374 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27759.1 | 0 | 4 | 368 | 24 | 389 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 26 | 369 | 30 | 366 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277518.1 | 0 | 4 | 368 | 12 | 377 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326144.1 | 0 | 6 | 369 | 8 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516214.1 | 0 | 4 | 369 | 7 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 75 | 363 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 77 | 363 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-21 | 85 | 367 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-21 | 85 | 367 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-21 | 85 | 367 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |