| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g047597m |
| Family | GH47 |
| Protein Properties | Length: 578 Molecular Weight: 64143.2 Isoelectric Point: 4.8462 |
| Chromosome | Chromosome/Scaffold: 00132 Start: 97079 End: 106921 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 21 | 425 | 0 |
| MFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLP AFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEY LLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQG QKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTE GHLLP | |||
| Full Sequence |
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| Protein Sequence Length: 578 Download |
| SLADGVTAEE ARQLRDEVRE MFYHAFDGYM EHAFPLDELR PLSCEGEDSL GGYALTLVDS 60 LDTLALLGDR ERFTTSVEWI GKNLQFDINK TVSVFETTIR VLGGLLSAHL IARSSPRLLP 120 AFDTPTGIPF GSVNLLHGVD EHESKITSTA GGGTLTLEFG VLSRLTNDPI FEQVTKKAVL 180 GIWARRSKLN LVGAHINVFT GEWTQKDAGI GTSIDSFYEY LLKAYLLFGD EEYLYIFQES 240 YQAAMHYLFN DPWYVEVNMD SAAIVWPLFN SLQAFWPGLQ VLAGDIDPAV RTHAAFFSVW 300 KRYGFTPEGF NLATLTIQQG QKSYPLRPEL IESTYLLYKA TRDPRYLDAG RDMVASLQYG 360 TRCPCGYCHI SDVEFHKKED HMESFFLAET VKYLWLLFDL AVGPDNLVEN GPYKYIFSTE 420 GHLLPATPQI SLKREHCSYF GAYCKDSDSK QGSETSGVSA DPQETNGSKF YGSWVHTGFP 480 SDSFLESTSV PGLIKGLCPG LTHGQKYGIT YLPLVDTAPE DVSPTQKEPS QPTVVQSHSV 540 VVVSDQGAHL IQSKPNSDHK NAQEVSPGRP ESDPPKI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 8.0e-77 | 15 | 429 | 467 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 3.0e-165 | 21 | 425 | 450 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26354.1 | 0 | 4 | 531 | 28 | 610 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199184.1 | 0 | 2 | 567 | 28 | 592 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280131.1 | 0 | 4 | 576 | 28 | 643 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311656.1 | 0 | 3 | 548 | 1 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517026.1 | 0 | 1 | 571 | 27 | 615 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 12 | 425 | 18 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayr_A | 0 | 2 | 398 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayq_A | 0 | 2 | 398 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayp_A | 0 | 2 | 398 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayo_A | 0 | 2 | 398 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EL445663 | 314 | 97 | 389 | 0 |
| EE593215 | 274 | 196 | 469 | 0 |
| GO368272 | 297 | 156 | 452 | 0 |
| DK483593 | 261 | 152 | 412 | 0 |
| EH768565 | 264 | 198 | 461 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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