y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g047621m |
Family | GH3 |
Protein Properties | Length: 550 Molecular Weight: 58857.1 Isoelectric Point: 7.8371 |
Chromosome | Chromosome/Scaffold: 00100 Start: 143660 End: 146798 |
Description | beta-xylosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 250 | 3.30006e-42 |
SVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGE DPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKF |
Full Sequence |
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Protein Sequence Length: 550 Download |
MAPAQNRNRA PKVSVLFLFL TYCSLQHSSS SAQSSPVFAC DVVSNPSLAS LGFCNTSLGI 60 DLRVGDLVKR LTLQEKITFL VDSAGSVSRL GIPKYEWWSE ALHGVSYVGP GTHFSNVVPG 120 ATSFPQVILT AASFNASLFQ AIGKVVSTEA RAMYNVGLAG LTFWSPNINI FRDPRWGRGQ 180 ETPGEDPLLA SKYATGYVKG LQQTDGGSPN RLKVAACCKH YTAYDLDNWK GTDRYHFNAM 240 VIYTYYLIKF KYIVSDCDSV DVLYNSQHYT KTPEEAAAKS ILAGLDLNCG SFLGKHTEAA 300 VKAGLVNESA IDHAISNNFA TLMRLGFFDG HPSKQPYGQL GPKDVCTQAN QDLALDAARQ 360 GIVLLKNTAG SLPLSPTAIK NLAVIGPNAN VTKTMIGNYE GTPCKYTTPL QGLAAVVATI 420 YQAGCSNVQC GTAQVDDAKK AAASADATVL VMGADQSIEA ESHDRLDLLL PGQQQLLITE 480 VAKVAKGPVI LIIMSGGGFD ISFAKNDPKI TSILWVGYPG QAGGAAIADV CFGRYNPSGR 540 LPMTWYPQSY 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 1.0e-28 | 249 | 549 | 337 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-34 | 81 | 317 | 283 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-37 | 88 | 426 | 388 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-42 | 362 | 550 | 196 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 0 | 16 | 550 | 589 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40687.1 | 0 | 8 | 550 | 6 | 597 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 10 | 550 | 200 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 35 | 550 | 1 | 564 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303181.1 | 0 | 1 | 550 | 1 | 596 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 32 | 550 | 35 | 599 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 3e-26 | 122 | 545 | 91 | 569 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u48_A | 3e-26 | 122 | 545 | 91 | 569 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u4a_B | 7e-26 | 122 | 545 | 91 | 569 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u4a_A | 7e-26 | 122 | 545 | 91 | 569 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 1x39_A | 6e-21 | 60 | 546 | 12 | 572 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |