y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g047891m |
Family | GH14 |
Protein Properties | Length: 552 Molecular Weight: 61961.3 Isoelectric Point: 8.8485 |
Chromosome | Chromosome/Scaffold: 00095 Start: 91141 End: 93532 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 92 | 506 | 0 |
FVMLPLDTLSNSGHLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCTIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDTIPLLRGRTPIQVYSDYMRSFRERFRDYLGDVVQEIQVGLGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMR ASLKASAEASGNEDWGRSGPHDSGQYNQFPEDTGFFRRDGTWNSEYGRFFMEWYSGKLIQHGDRILAAAKEIFQGTGSKLSGKVAGIHWHYRSRSHAAEL TAGYYNTRYRDGYIPIARMLAKHGVILNFTCMEMRDTEQPGNANCSPEGLVRQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDAGNGLSAFTYL RMNKKLFMSDNWRNL |
Full Sequence |
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Protein Sequence Length: 552 Download |
MALTLRSSTS FINLNDTKTI KTPDEFSSPT TCFAKIKPSR RLRAKSSMQE AQLCRDKHST 60 MGGIIRKSEK REMVHELASP PHNHHRNKVP VFVMLPLDTL SNSGHLNKPR AMNASLMALK 120 SAGVEGVMVD AWWGLVEKDG PLNYNWEGYA ELIQMVQKHG LKLQVVMSFH QCGGNVGDSC 180 TIPLPPWVLE EISKNPDLVY TDKSGRRNPE YISLGCDTIP LLRGRTPIQV YSDYMRSFRE 240 RFRDYLGDVV QEIQVGLGPC GELRYPAYPE SNGTWKFPGI GEFQCYDKYM RASLKASAEA 300 SGNEDWGRSG PHDSGQYNQF PEDTGFFRRD GTWNSEYGRF FMEWYSGKLI QHGDRILAAA 360 KEIFQGTGSK LSGKVAGIHW HYRSRSHAAE LTAGYYNTRY RDGYIPIARM LAKHGVILNF 420 TCMEMRDTEQ PGNANCSPEG LVRQVKMATR TAGVELAGEN ALERYDADAY AQVLATSNLD 480 AGNGLSAFTY LRMNKKLFMS DNWRNLVEFV QRMSSEGRRP RLPEWDSTGS DLCVGFVKGK 540 NGTKTKEAAL V* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-152 | 21 | 516 | 516 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 3.0e-173 | 92 | 509 | 429 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 551 | 552 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 89 | 520 | 438 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 87 | 513 | 435 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 551 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 551 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 551 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 551 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 551 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1q6c_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 78 | 516 | 1 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 548 | 1 | 544 | 0 |
HO794833 | 412 | 127 | 538 | 0 |
HO781538 | 405 | 33 | 436 | 0 |
HO825836 | 387 | 163 | 549 | 0 |
CK293967 | 311 | 163 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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