Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g048257m |
Family | CBM43 |
Protein Properties | Length: 511 Molecular Weight: 55213.5 Isoelectric Point: 5.3134 |
Chromosome | Chromosome/Scaffold: 00117 Start: 366281 End: 367998 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 368 | 449 | 9.4e-24 |
WCTVNPDATDTSKLAEKMQFACNKSDCTSLGFGSSCNKLDGNGKVSYAFNMYYQMNNQDDRACDFQGLGKVTTENISQGTCN | |||
GH17 | 24 | 346 | 0 |
LGVNWGTVASHQLPPKTTVKLLKDNGILKVKLFDADNTILDALAGTDIEVMLAVSNQELKTMTDFDKAKEWVKANVTKYTNKGGVNIKFVAVGNEPFLKA YNGSHINTTFPALKNIQNALNDAGVGDTIKATVPFNADVYDSPDKNPYPSAGKFRTDIFATMKEIVDFLAENKAPFIVNIYPFLSLYGNDDFPVDYAFFD GGKSIVDSVTGNKYTDVFDANYDTCVSALKAAGHGDMPVVVGEIGWPTDGDKMANTANAFRYYSGLLPKLAADKGTPLRPGSYIEVYMFSLFDEDSKSID PGNFEKHWGIFTYDGQPKFPMDF |
Full Sequence |
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Protein Sequence Length: 511 Download |
MVGSCLFLRI ILFVGVLGCR VNGLGVNWGT VASHQLPPKT TVKLLKDNGI LKVKLFDADN 60 TILDALAGTD IEVMLAVSNQ ELKTMTDFDK AKEWVKANVT KYTNKGGVNI KFVAVGNEPF 120 LKAYNGSHIN TTFPALKNIQ NALNDAGVGD TIKATVPFNA DVYDSPDKNP YPSAGKFRTD 180 IFATMKEIVD FLAENKAPFI VNIYPFLSLY GNDDFPVDYA FFDGGKSIVD SVTGNKYTDV 240 FDANYDTCVS ALKAAGHGDM PVVVGEIGWP TDGDKMANTA NAFRYYSGLL PKLAADKGTP 300 LRPGSYIEVY MFSLFDEDSK SIDPGNFEKH WGIFTYDGQP KFPMDFSGKG ENKTLVGAKD 360 VKYLPKKWCT VNPDATDTSK LAEKMQFACN KSDCTSLGFG SSCNKLDGNG KVSYAFNMYY 420 QMNNQDDRAC DFQGLGKVTT ENISQGTCNF LIQLEPPPPP PQSSSSSGSS PDSKSSSSSS 480 SSSPSSHAYP SLSASLVGLA FIAVLTFMLV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-8 | 252 | 337 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-14 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-27 | 367 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-76 | 24 | 346 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_179534.1 | 0 | 7 | 454 | 3 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 1 | 455 | 1 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 2 | 454 | 1 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325410.1 | 0 | 2 | 454 | 1 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 2 | 458 | 1 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 24 | 347 | 2 | 316 | B Chain B, Crystal Structure Of The Botulinum Neurotoxin Type B Complexed With Synaptotagamin-Ii Ectodomain |
PDB | 3f55_C | 0 | 24 | 347 | 2 | 316 | B Chain B, Crystal Structure Of The Botulinum Neurotoxin Type B Complexed With Synaptotagamin-Ii Ectodomain |
PDB | 3f55_B | 0 | 24 | 347 | 2 | 316 | B Chain B, Crystal Structure Of The Botulinum Neurotoxin Type B Complexed With Synaptotagamin-Ii Ectodomain |
PDB | 3f55_A | 0 | 24 | 347 | 2 | 316 | B Chain B, Crystal Structure Of The Botulinum Neurotoxin Type B Complexed With Synaptotagamin-Ii Ectodomain |
PDB | 3em5_D | 0 | 24 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |