Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g048380m |
Family | CBM43 |
Protein Properties | Length: 251 Molecular Weight: 26137.9 Isoelectric Point: 4.5564 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1295492 End: 1296244 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 117 | 197 | 8.3e-32 |
WCIANPSASETGLQVALDYACGFGGADCSAIQPGASCYNPNTIHDHASYAFNDYYHKNPAPTSCVFGGAAQLTYTDPSKLC |
Full Sequence |
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Protein Sequence Length: 251 Download |
SSVAEKLQLE ASQKNRKLET QESRILSSSP SLFITQLDAN VPVVNPTTPG TSPPTVNPPP 60 SPTITGPSPP SPTTTGPSPP SPTTTGPSPP SPTTTGPTIT PPAPSTTTTP ASSGGAWCIA 120 NPSASETGLQ VALDYACGFG GADCSAIQPG ASCYNPNTIH DHASYAFNDY YHKNPAPTSC 180 VFGGAAQLTY TDPSKLCSSE RNNQLYEFSS TYLDTIQTHL DSLLELLQVM ETVTTPHPQD 240 QPGKYFMAIL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-21 | 117 | 186 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-34 | 117 | 194 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94231.1 | 0 | 2 | 195 | 25 | 225 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 3.00018e-42 | 113 | 195 | 31 | 113 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271903.1 | 9.94922e-44 | 17 | 194 | 32 | 207 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331855.1 | 1.99993e-41 | 115 | 194 | 1 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519744.1 | 0 | 1 | 195 | 16 | 193 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000000003 | 113 | 194 | 9 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY296310 | 133 | 119 | 251 | 0 |
DY269997 | 82 | 116 | 197 | 0 |
DY269997 | 58 | 193 | 250 | 0 |
FC892268 | 82 | 116 | 197 | 0 |
FC892268 | 58 | 193 | 250 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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