Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g048582m |
Family | GT47 |
Protein Properties | Length: 556 Molecular Weight: 62407.7 Isoelectric Point: 9.4635 |
Chromosome | Chromosome/Scaffold: 00056 Start: 4735 End: 7648 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 218 | 499 | 0 |
EQKFKVFVYEEGEPPVFHDGPCKSIYSMEGNFIYTMEVNKQFRTKEADKAHVFFLPFSVVKLVRFVYVRDSHDFGPIRRTVIDYVNLIAGKYPYWNRSLG ADHFMLACHDWGPETSFSVPYLGKNSIRVLCNANTSEKFSPVKDVSFPEINLQTGGLTGLIGGPSPSRRSILAFFAGGVHGPIRPVLLEHWENKDEDIRV HKYLPKGVSYYEMMRKSKYCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKSFSVALSTRDIPNLKSILTSI |
Full Sequence |
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Protein Sequence Length: 556 Download |
MMLMGSSSFS SSFKVLLFMI PLAVLFGFVS VMGPRASTSP VILSNHPWLW SSFSSSSSSP 60 NNNQLKIDMV ASKAKAVDLH STVVMAGVED QNEGLLSDPL NLNRSSSTPT TVQPAVQVQD 120 QSNSTMEIDG LNISMSTTNK TLGVAVAAAT NETHAVPMKA ERKRAVTKLE KLEAGLQRAR 180 VAIKEASIGN QTQDPDFVPL GPMYWDSKAF HRSYLEMEQK FKVFVYEEGE PPVFHDGPCK 240 SIYSMEGNFI YTMEVNKQFR TKEADKAHVF FLPFSVVKLV RFVYVRDSHD FGPIRRTVID 300 YVNLIAGKYP YWNRSLGADH FMLACHDWGP ETSFSVPYLG KNSIRVLCNA NTSEKFSPVK 360 DVSFPEINLQ TGGLTGLIGG PSPSRRSILA FFAGGVHGPI RPVLLEHWEN KDEDIRVHKY 420 LPKGVSYYEM MRKSKYCLCP SGYEVASPRV VEAIYTGCVP VLISEHYVPP FSDVLNWKSF 480 SVALSTRDIP NLKSILTSIS PRQYIRMHRR VVQVRRHFEF NSPPKRFDVF HMILHSIWLR 540 RLNVRIQNDQ SAVTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-64 | 217 | 499 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 147 | 547 | 6 | 406 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 105 | 547 | 89 | 516 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 217 | 548 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 217 | 544 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 37 | 555 | 51 | 574 | catalytic, putative [Ricinus communis] |