Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa001075m |
Family | GT41 |
Protein Properties | Length: 918 Molecular Weight: 101754 Isoelectric Point: 5.8524 |
Chromosome | Chromosome/Scaffold: 7 Start: 13543313 End: 13554878 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 363 | 860 | 0 |
IKPNFSQSLNNLGVVYTVQGKMDAAANMIEKAIIANPTYAEAYNNLGVLYRDAGNITLAIDAYEQCLKIDPDSRNAGQNRLLAMNYINEGHDEKLFVAHR DWGRRFMRLYPQYASWDNPKDPERPLVIGYISPDYFTHSVSYFIEAPLAHHEYAKYKVVVYSAVVKADAKTIRFRDKVLKKGGIWRDIYGIDEKKVATMV REDKVDILVELTGHTANNKLGTMACRPSPVQVTWIGYPNTTGLPAIDYRITDSLADPPDSKQKHVEELVRLPDCFLCYTPSPEAGPVLPTPALSNGFITF GSFNNLAKITPKVLQVWARILSAIPNSRLVVKCKPFSCDSVRERFLSTLEQLGLEPLRVDLLPLILLNYDHMQAYSLMDISLDTFPYAGTTTTCESLYMG VPCVTMAGSVHAHNVGVSILGKVGLGNLIAKNEDEYVQLAVQLASDVTALSNLRMGLRDLMSRSPVCDGPKFTLGLESAYRNMWHRYCKGDVPSQRHI |
Full Sequence |
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Protein Sequence Length: 918 Download |
MAWTEKDVGN GRDGNSVGEN GFLDGSHPSP STSGSIVAVP PVGKRFEVKD ALSYANILRS 60 RNKFADALSL YETVLEKDAG NVEAHIGKGI CLQMKNMGRL AFDSFTEAIR LDPQNACALT 120 HCGILYKDEG RLREAAESYQ KALKADPSYK PAAECLAIVL TDLGTSLKLA GNTQEGLQKY 180 YEALKTDPHY APAYYNLGVV YSEMMQFDTA LSCYEKAALE RPMYAEAYCN MGVIYKNRGD 240 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DIDQGISYYK KALYYNWHYA 300 DAMYNLGVAY GEMLKFDMAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL DKAVECYQLA 360 LSIKPNFSQS LNNLGVVYTV QGKMDAAANM IEKAIIANPT YAEAYNNLGV LYRDAGNITL 420 AIDAYEQCLK IDPDSRNAGQ NRLLAMNYIN EGHDEKLFVA HRDWGRRFMR LYPQYASWDN 480 PKDPERPLVI GYISPDYFTH SVSYFIEAPL AHHEYAKYKV VVYSAVVKAD AKTIRFRDKV 540 LKKGGIWRDI YGIDEKKVAT MVREDKVDIL VELTGHTANN KLGTMACRPS PVQVTWIGYP 600 NTTGLPAIDY RITDSLADPP DSKQKHVEEL VRLPDCFLCY TPSPEAGPVL PTPALSNGFI 660 TFGSFNNLAK ITPKVLQVWA RILSAIPNSR LVVKCKPFSC DSVRERFLST LEQLGLEPLR 720 VDLLPLILLN YDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMAG SVHAHNVGVS 780 ILGKVGLGNL IAKNEDEYVQ LAVQLASDVT ALSNLRMGLR DLMSRSPVCD GPKFTLGLES 840 AYRNMWHRYC KGDVPSQRHI EMLQQEVITE EPAAEISEST SITTPREGPP GSIKTNGFIP 900 LPQPVLNLST CEENGGV* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
TIGR02917 | PEP_TPR_lipo | 9.0e-22 | 55 | 464 | 419 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. |
TIGR02917 | PEP_TPR_lipo | 6.0e-23 | 36 | 434 | 401 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. |
TIGR02917 | PEP_TPR_lipo | 2.0e-24 | 52 | 434 | 417 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. |
COG3914 | Spy | 8.0e-83 | 317 | 849 | 562 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0042802 | identical protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAX46402.1 | 0 | 1 | 915 | 1 | 915 | putative SPINDLY protein [Rosa luciae] |
RefSeq | XP_002281883.1 | 0 | 1 | 915 | 1 | 912 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308458.1 | 0 | 1 | 914 | 1 | 920 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 0 | 1 | 903 | 1 | 909 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530535.1 | 0 | 1 | 914 | 1 | 914 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1w3b_B | 5e-39 | 89 | 409 | 41 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 3e-31 | 110 | 441 | 27 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 2e-27 | 56 | 375 | 75 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 3e-25 | 170 | 477 | 12 | 340 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 0.00000000000004 | 67 | 272 | 188 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY295408 | 401 | 430 | 827 | 0 |
GO867600 | 330 | 321 | 650 | 0 |
GO867600 | 142 | 139 | 278 | 0.00000000000006 |
GO867600 | 140 | 248 | 385 | 0.00000009 |
GO867600 | 136 | 57 | 190 | 0.46 |
Sequence Alignments (This image is cropped. Click for full image.) |
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