Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa001692m |
Family | GH3 |
Protein Properties | Length: 780 Molecular Weight: 83618.1 Isoelectric Point: 7.4805 |
Chromosome | Chromosome/Scaffold: 1 Start: 44134298 End: 44138604 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 92 | 341 | 0 |
SVSRLGIPKYEWWSEALHGVSNVGPGTKFTNVVPGATSFPQVILTAASFNASLFEAIGRVVSTEARAMYNVGLAGLTYWSPNINIFRDPRWGRGQETPGE DPLLSSKYGSGYVRGLQQTDGGDKNKLKVAACCKHYTAYDLDNWKGVDRYHFNAVVTKQDLDDTFQPPFKSCVIDGNVASVMCSYNQVNGIPTCADPDLL AGVIRGEWKLNGYIVTDCDSLDVYYNTQHYTKTPEEAAAKALLAGVDLNC |
Full Sequence |
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Protein Sequence Length: 780 Download |
MASSAQNRAP KLSVFSVFLC SFMFQHLFLS PNANRAFAQS SPVFACDVGS NASVSSFGFC 60 DTSLAIDLRV ADLVKRLTLQ EKIGFLVNSA GSVSRLGIPK YEWWSEALHG VSNVGPGTKF 120 TNVVPGATSF PQVILTAASF NASLFEAIGR VVSTEARAMY NVGLAGLTYW SPNINIFRDP 180 RWGRGQETPG EDPLLSSKYG SGYVRGLQQT DGGDKNKLKV AACCKHYTAY DLDNWKGVDR 240 YHFNAVVTKQ DLDDTFQPPF KSCVIDGNVA SVMCSYNQVN GIPTCADPDL LAGVIRGEWK 300 LNGYIVTDCD SLDVYYNTQH YTKTPEEAAA KALLAGVDLN CGPFLGKYTE GAVKGGLVNE 360 AAIDKAISNN FATLMRLGFF DGDPSKLPYG KLGPKDVCTP ENQELARETA RQGIVLLKNS 420 PGSLPLSPTA IKSLAVIGPN AAVTKTMIGN YEGIPCKYTT PLQGLTASVA TTYVPGCANV 480 ACGTAQVDDA KKAAASADAT VLVVGADQSI EAESRDRIDL HLPGQQTLLV TEVAKASKGP 540 VILVIMSGGG FDISFAKNDS KITSILWVGY PGEAGGAAIA DVIFGHYNPS GRLPMTWYPQ 600 SYVDKVPMTN MNMRPDASNG YPGRTYRFYT GETVYSFGDG LGYSAFNHKL VRAPKLVSIP 660 LEEGHVCHSS SCKSLDVVQE RCENLAFDIH LGVKNTGSMS GGHTVLLFSS PPSVHNSPQK 720 HLLGFEKVFL SAQREELVKF KVDVCKHLSV VDELGNRKVA LGQHVLHVGS LKHSFSVGI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-54 | 414 | 644 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-57 | 94 | 477 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-62 | 78 | 369 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-76 | 40 | 744 | 788 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 27 | 779 | 774 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 3 | 779 | 2 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 1 | 779 | 192 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 39 | 779 | 28 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 41 | 779 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 1 | 779 | 1 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 128 | 742 | 91 | 696 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3u48_A | 0 | 128 | 742 | 91 | 696 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3u4a_B | 0 | 128 | 742 | 91 | 696 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3u4a_A | 0 | 128 | 742 | 91 | 696 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 1x39_A | 4e-37 | 59 | 608 | 5 | 580 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |