| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa002686m |
| Family | GT5 |
| Protein Properties | Length: 646 Molecular Weight: 70859.5 Isoelectric Point: 5.2967 |
| Chromosome | Chromosome/Scaffold: 2 Start: 25710268 End: 25715232 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 135 | 635 | 0 |
| NIVFVTAEAAPYSKTGGLGDVCGSLPTVLAARGHRVMVVSPRYQNGTAAADQKFSGALDLDTRIKIYCFGGDQEVGFFHEYREGVDWVFVDHPSFHRPGN PYGDSFGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFMVNDWHAGLVPLLLAAKYRPYGVYKDARSVVVIHNLAHQGVEPAVTFKNLGIPPEWY GALEWVFPTWARTHALDTGEAVNILKGAIVTSDRILTVSEGYSWEITTVEGGYGLNELLSSRKSIITGITNGVDVVEWDPSSDVHIASHYSADDLSGKVQ CKLALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIQSGMPQLMEDDVQFVMLGSGDPLCEDWMRAAEATYKDKFRGWVGFNVPVSHRITAGCDILLMPSR FEPCGLNQLYAMRYGTVPVVHSTGGLRDTVLNFNPYAQGGQGDGTGWTFSPLTKESMLAALRLACRTFTEYKPSWEGLMKRGMERDFTWESAAVKYEQVF E | |||
| Full Sequence |
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| Protein Sequence Length: 646 Download |
| MESLKFTSLI PCKSSVNLIP TTKFVNHEVI GQVGFVPLWK RRSTRPAFRL RAQVSGGSGG 60 AQDGASALED QREEKGVLLG AETDSSGSVI GFNLIPPNGE LKVPDSPPED ATSDRLDETE 120 DIDGKEKSKA KVTRNIVFVT AEAAPYSKTG GLGDVCGSLP TVLAARGHRV MVVSPRYQNG 180 TAAADQKFSG ALDLDTRIKI YCFGGDQEVG FFHEYREGVD WVFVDHPSFH RPGNPYGDSF 240 GAFGDNQFRF TLLCHAACEA PLVLPLGGYT YGEKCLFMVN DWHAGLVPLL LAAKYRPYGV 300 YKDARSVVVI HNLAHQGVEP AVTFKNLGIP PEWYGALEWV FPTWARTHAL DTGEAVNILK 360 GAIVTSDRIL TVSEGYSWEI TTVEGGYGLN ELLSSRKSII TGITNGVDVV EWDPSSDVHI 420 ASHYSADDLS GKVQCKLALQ KELGLPIRPD CPLIGFIGRL DYQKGIDLIQ SGMPQLMEDD 480 VQFVMLGSGD PLCEDWMRAA EATYKDKFRG WVGFNVPVSH RITAGCDILL MPSRFEPCGL 540 NQLYAMRYGT VPVVHSTGGL RDTVLNFNPY AQGGQGDGTG WTFSPLTKES MLAALRLACR 600 TFTEYKPSWE GLMKRGMERD FTWESAAVKY EQVFEWAFID PPYIC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-103 | 139 | 634 | 508 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 6.0e-142 | 135 | 645 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-173 | 135 | 635 | 509 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 135 | 636 | 502 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 135 | 635 | 502 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25893.1 | 0 | 1 | 644 | 1 | 632 | starch synthase isoform I [Manihot esculenta] |
| DDBJ | BAD18845.1 | 0 | 41 | 643 | 34 | 644 | starch synthase I precursor [Phaseolus vulgaris] |
| EMBL | CBI23015.1 | 0 | 77 | 644 | 1 | 567 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277372.1 | 0 | 1 | 644 | 1 | 632 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321996.1 | 0 | 43 | 644 | 23 | 648 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 135 | 634 | 11 | 508 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3vue_A | 0 | 135 | 634 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 135 | 634 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 135 | 634 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 135 | 634 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO595058 | 493 | 151 | 643 | 0 |
| HO581986 | 368 | 245 | 611 | 0 |
| GO872237 | 347 | 296 | 642 | 0 |
| GO842198 | 337 | 158 | 494 | 0 |
| HO581986 | 34 | 610 | 643 | 0.00006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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