| Basic Information | |
|---|---|
| Species | Prunus persica |
| Cazyme ID | ppa003803m |
| Family | AA7 |
| Protein Properties | Length: 549 Molecular Weight: 60192.2 Isoelectric Point: 6.4062 |
| Chromosome | Chromosome/Scaffold: 7 Start: 12628636 End: 12636356 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 135 | 330 | 8.6e-28 |
| NIPDVVVFPRSEEQVSKIVNSCDKHKVPIVPYGGATSIEGHTLSPNGGVCIDMSLMNHVKALHVEDMDVVVEPGVGWMELNEYLEPYGLFFPLDPGPGAT IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPTVKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 549 Download |
| MAMSSWFSRL RCSSKCFFNF LALRSSVSRK LVRTQTTTNS ESTKNPLLFW SSSLLPIALA 60 VSAGSLALHP QSDPSLCEAS SINSRAEFVV KGSHKEVPRE LIDELKAICQ DNMTLDYEER 120 YNHGKPQNSF HKAVNIPDVV VFPRSEEQVS KIVNSCDKHK VPIVPYGGAT SIEGHTLSPN 180 GGVCIDMSLM NHVKALHVED MDVVVEPGVG WMELNEYLEP YGLFFPLDPG PGATIGGMCA 240 TRCSGSLAVR YGTMRDNVIS LKVVLANGDV VKTASRARKS AAGYDLTRLV IGSEGTLGVI 300 TEVTLRLQKI PQYSVVAMCN FPTVKDAADV AIATMLSGIQ VSRVELLDEV QVRAINIANG 360 KSLPETPTLM FEFIGTVQKI ASEHNGSDFI FAEDPETKKE LWKMRKEALW ACFAMEPNFE 420 AMISDVCVPL SCLAELISRS KQELDASELI CTVIAHAGDG NFHALILFDP YNEEHRREAQ 480 RLNHFMVHTA LSMEGTCTGE HGVGTGKMKY LEQELGMEAL KTMKRIKAAL DPNNTMNPGK 540 LIPSHVCF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 4.0e-49 | 136 | 547 | 428 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 2.0e-66 | 310 | 541 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 2.0e-92 | 140 | 540 | 420 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 1.0e-123 | 104 | 544 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 9 | 548 | 556 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 86 | 548 | 83 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 1 | 548 | 1 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 1 | 548 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 87 | 548 | 8 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 548 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 9e-39 | 100 | 542 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 9e-39 | 100 | 542 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 9e-39 | 100 | 542 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 9e-39 | 100 | 542 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 9e-39 | 100 | 542 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 323 | 151 | 462 | 0 |
| DY305587 | 296 | 193 | 478 | 0 |
| EX261606 | 322 | 208 | 515 | 0 |
| EL444323 | 279 | 87 | 365 | 0 |
| DT747637 | 285 | 180 | 454 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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