y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa003812m |
Family | GH14 |
Protein Properties | Length: 548 Molecular Weight: 60937 Isoelectric Point: 8.3775 |
Chromosome | Chromosome/Scaffold: 5 Start: 5482025 End: 5484611 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 88 | 502 | 0 |
YVMLPLDTVSHGGHLNKPRAMNASLMALKNAGVEGVMVDAWWGLVEKDGPSKYNWEGYAELVQMVQKHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE VSMNPDLVYTDKSGRRNPEYISLGCDSLPVLGGRTPIQVYTDYMRSFHDRFRDYLGNVIVEIQVGMGPCGELRYPAYPESNGTWRFPGIGEFQCYDKYMS ASLEASAEALGKRDWGRSGPHDAGQYNQFPEDTGFFKRDGTWNTEYGQFFLEWYSGKLLRHGDRILTAAKGVFQGSGAKLSGKIAGIHWHYGSRSHAAEL TAGYYNTRHRDGYLPTARMFSKNGVVLNFTCMEMKDREQPAHANCSPEGLVRQVKMATKSAGIDLAGENALERYDTGAFEQVLATSRSDSGNALSAFTYL RMNKRLFEADNWRNM |
Full Sequence |
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Protein Sequence Length: 548 Download |
MTLTLRSSTS FINLNDHKSL KASDESSGTI CYAQIKPTCR LRAKSSMQET QLLQEKTLMT 60 AGTDGRREML HALPNIAHSS NGSKVPVYVM LPLDTVSHGG HLNKPRAMNA SLMALKNAGV 120 EGVMVDAWWG LVEKDGPSKY NWEGYAELVQ MVQKHGLKIQ VVMSFHQCGG NVGDSCSIPL 180 PPWVLEEVSM NPDLVYTDKS GRRNPEYISL GCDSLPVLGG RTPIQVYTDY MRSFHDRFRD 240 YLGNVIVEIQ VGMGPCGELR YPAYPESNGT WRFPGIGEFQ CYDKYMSASL EASAEALGKR 300 DWGRSGPHDA GQYNQFPEDT GFFKRDGTWN TEYGQFFLEW YSGKLLRHGD RILTAAKGVF 360 QGSGAKLSGK IAGIHWHYGS RSHAAELTAG YYNTRHRDGY LPTARMFSKN GVVLNFTCME 420 MKDREQPAHA NCSPEGLVRQ VKMATKSAGI DLAGENALER YDTGAFEQVL ATSRSDSGNA 480 LSAFTYLRMN KRLFEADNWR NMVEFVRGMG DGGRNRSLSE CDSTGSNLFV RFIKEKNVKK 540 TKETVLV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 6.0e-147 | 79 | 509 | 442 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 2.0e-170 | 88 | 505 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 533 | 535 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 82 | 512 | 437 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 85 | 509 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 547 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 547 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 547 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 547 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 547 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1q6c_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 537 | 1 | 533 | 0 |
HO794833 | 411 | 123 | 533 | 0 |
HO781538 | 405 | 30 | 432 | 0 |
HO825836 | 375 | 159 | 533 | 0 |
DV161367 | 302 | 119 | 420 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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